Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0996 ATGGTGTCCACGTCTCAGAAGAAAAGCCTCCACTCCATCCTTGCTGCAAACCTTGGCAAGCTCACCATACCTTCTTCTTCTTCCTCCACCACTCACCATGATTTCGACTTTCCTCCTTTCTCTTCCCACGATCCCAATTCATCTCCATCCACTGCCATCCCTGGTAGCCCACAGATTATTCAGAGTAGGTCCCACTCCTTTGTAGGACCCTCCCCTCGATTCGCCCAATCCTCCAATTCCCTGGCGTTCGTTAATGAGCTCGATTCCCAGAGCGATGACGAGACTGAAATTGTTGTCGGAAGTGGGTTAGGAATCGATTCTGAAGTTTGCGAAAAGCAAGAAGTGAGTGCGAGTGATTCTGGAGAGAAATTGGTCTGCAAAATTGGACCTGGGGATTTTCAAATCTTGAGAGTTGTCGGGCAGGGCGCGTTCGGGAAGGTCTTTCAGGTAAGGAAATATAGTGACCGTTTGGATGGAGAGGGTGGCGGCGGCCGCCATGGCGATGGCATTTTTGCAATGAAGGTGATGCGGAAGGAGACGATCATAAAGAAGAATCATGTGGATTATATGAAAGCCGAGAGAGATATTCTCACTAAAGTGGTTCATCCTTTTATTGTTCAGCTTCGTTACTCTTTTCAGACCAAATCTAAATTATACTTGATCTTGGACTTTATAAATGGAGGACATCTCTTCTTTCATCTGTATCGCCAGGGTATCTTCAGTGAGGATCAGGCAAGGCTTTACACTGCTGAGATAGTATCTGCTGTTTCTCATCTTCACAAGTGTGGAATCGTGCATCGAGATCTTAAACCAGAAAATATACTTATGGATGCTGACGGGCATGTAATGTTAACTGATTTTGGATTGGCAAAGGAAATTGATGAATCAGGGAGATCTAACTCTTTATGTGGGACCACAGAATATATGGCTCCAGAAATCTTACTGGCTAAAGGCCACAACAAGGAGGCAGATTGGTGGAGCGTCGGCATACTGTTGTATGAAATGCTAACGGGGAAGCCCCCATTTACACACGCTAACAGAAAGAAACTACAAGAGAAAATTGTTAAAGAGAAAGTGAAACTTCCACCATTACTTACCGGTGAAGCTCACTCTTTGCTTAAAGGATTGCTGCAAAAGGATCCATCAAAAAGGTTGGGCAATGGACCAAATGGAGACATCCAGATTAAAAGTCACAAGTGGTTTCACTCAATCAATTGGAAGAAACTGGAGGCAAGAGAACTGCAGCCAAAATTCAAACCAGATGTGAATGGCTTAGACTGTACGGCTAATTTTGATCAATGCTGGACCTCAATGTCTCCTGTTGATTCACCAGCACCCACACCTACAGCATCTGACCATTTCCAGGGCTATTCTTATGTGGCACCGAACCCTTGGCTTTCATCGAACTTGACTGAATGA 1419 0.4489 MVSTSQKKSLHSILAANLGKLTIPSSSSSTTHHDFDFPPFSSHDPNSSPSTAIPGSPQIIQSRSHSFVGPSPRFAQSSNSLAFVNELDSQSDDETEIVVGSGLGIDSEVCEKQEVSASDSGEKLVCKIGPGDFQILRVVGQGAFGKVFQVRKYSDRLDGEGGGGRHGDGIFAMKVMRKETIIKKNHVDYMKAERDILTKVVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARLYTAEIVSAVSHLHKCGIVHRDLKPENILMDADGHVMLTDFGLAKEIDESGRSNSLCGTTEYMAPEILLAKGHNKEADWWSVGILLYEMLTGKPPFTHANRKKLQEKIVKEKVKLPPLLTGEAHSLLKGLLQKDPSKRLGNGPNGDIQIKSHKWFHSINWKKLEARELQPKFKPDVNGLDCTANFDQCWTSMSPVDSPAPTPTASDHFQGYSYVAPNPWLSSNLTE 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0996 472 SMART pkinase_C_6 402 461 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele17g0996 472 Pfam Protein kinase C terminal domain 422 459 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lele17g0996 472 Pfam Protein kinase domain 133 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0996 472 ProSiteProfiles AGC-kinase C-terminal domain profile. 402 469 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele17g0996 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Lele17g0996 472 MobiDBLite consensus disorder prediction 25 71 - -
Lele17g0996 472 ProSiteProfiles Protein kinase domain profile. 133 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0996 472 Gene3D Phosphorylase Kinase; domain 1 132 445 - -
Lele17g0996 472 Gene3D Transferase(Phosphotransferase) domain 1 225 420 - -
Lele17g0996 472 SMART serkin_6 133 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0996 472 FunFam Non-specific serine/threonine protein kinase 225 420 - -
Lele17g0996 472 SUPERFAMILY Protein kinase-like (PK-like) 131 465 IPR011009 -
Lele17g0996 472 FunFam Non-specific serine/threonine protein kinase 131 247 - -
Lele17g0996 472 PANTHER RIBOSOMAL PROTEIN S6 KINASE 85 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0996 Lele-ChrLele17 20763624 20766379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0996 57 462 AGC Kinase Gene Family AT3G08720 60.636 2.94e-180 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Lele17g0996 Pkinase 3.5e-70 CL0016