Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0994 ATGGATCCTCCTCTCATCAACGAGTCCACATTCTCCCACGCTAATCCCTCAGCCTATAGTCTCGCCGAGATTTGGCCTTTCCCTGGGGACCACCCTCCTGGACCTGGATTGGGCCTCCGAATGCCCCATTTAGGTCACAATTTGCCCTCCTTTCCCGGAGATGGCTCCGCCGAGGAGTCCACCGTCACGGAGCAGAGTGTCGGCGGCGGCGGAGGAAATCACAGGAAGAGGAAAGATGTCACGTCTGAGGACGAGTCCTCAAAGATGGTTTCCATGATTAGTGCCAATGATTTGAATAATTCTGGAAATAAACGGATAAAATTAGGAGAATCCACGAATGAAAATGGTCGTATGAAGGCTGAAGTAGAAGCAAGTGCAGTAGCTGGTAGCAAGTCAGCTGAACAAAGTACTAAACCTTCTGAGCCACCTAAGCCTGACTATATACACGTGAGAGCAAGAAGAGGCCAAGCTACTGATAGCCACAGTCTTGCAGAAAGAGCAAGAAGGGAAAAGATCAGCGAGAGGATGAAAATTCTACAAGATTTGGTCCCTGGATGTAACAAGGTAATTGGTAAAGCACTTGTCCTGGATGAGATAATTAATTATATTCAATCCCTGCAGCGGCAGGTTGAGTTCCTTTCGATGAAGCTCGAAGCAGTTAATTCGAGAATGAACATGAACCCAACTACTGAAGGGTTCCCTTCAAAAGATCTAGGTGCTCAGACACTTGACGTTGCTGGAATGATATTTGGATCACAAGCAGGCAGGACGTATCCTCAGGGAACACAACTCGGATGGCTGCAAATGCAGATTGGTGGTGGTGATGGTGGTTTCGAGAGAGCAACATAG 849 0.4794 MDPPLINESTFSHANPSAYSLAEIWPFPGDHPPGPGLGLRMPHLGHNLPSFPGDGSAEESTVTEQSVGGGGGNHRKRKDVTSEDESSKMVSMISANDLNNSGNKRIKLGESTNENGRMKAEVEASAVAGSKSAEQSTKPSEPPKPDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNMNPTTEGFPSKDLGAQTLDVAGMIFGSQAGRTYPQGTQLGWLQMQIGGGDGGFERAT 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0994 282 MobiDBLite consensus disorder prediction 46 147 - -
Lele17g0994 282 CDD bHLH_AtBPE_like 146 230 - -
Lele17g0994 282 Coils Coil 203 223 - -
Lele17g0994 282 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 64 249 IPR024097 GO:0006355
Lele17g0994 282 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 156 206 IPR011598 GO:0046983
Lele17g0994 282 FunFam Basic helix-loop-helix transcription factor 153 226 - -
Lele17g0994 282 MobiDBLite consensus disorder prediction 54 68 - -
Lele17g0994 282 Pfam Helix-loop-helix DNA-binding domain 160 207 IPR011598 GO:0046983
Lele17g0994 282 Gene3D - 153 229 IPR036638 GO:0046983
Lele17g0994 282 SMART finulus 162 212 IPR011598 GO:0046983
Lele17g0994 282 MobiDBLite consensus disorder prediction 86 109 - -
Lele17g0994 282 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 154 226 IPR036638 GO:0046983
Lele17g0994 282 MobiDBLite consensus disorder prediction 71 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0994 Lele-ChrLele17 20756221 20758892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0994 1 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 56.271 3.27e-87 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele17g0994 HLH 2.3e-08 No_clan