Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0990 ATGGTGAGGCCTCCATGCTGCGAGAAGCTTGGTGTTAAGAAAAAGGGTGTTTGGACTCCAGAAGAAGATGCAAAGATGATCGCATTTGTCTCAAAGCATGGATCTGGTAATTGGACTTCTGTTCCCAAAAACGCAGGTTTAAAGAGGTGTGGGAAAAGTTGTCGGCTTAGGTGGACGAATTACCTCAGACCAGATCTTAAGCATGATAGCTTCGCACCCCATGAAGAGGATTTAATTCTTAAGCTTCACGCAGCCATTGGAAGCAGGTGGTCTATGATTGCCCAACAAATTCCTGGGAGAACAGACAACGATGTAAAGAATTATTGGAACACAAAGCTGAAGAAGAAGCTCACTGGCATGGGAATAGACCCTGTCACTCACAAGCCCTTCTCTAAACTCTTAGCTGACTATGGAAACATTGGGGGTATCCAGAAACCAAGCACCCGAATTGGTTCTCTCGGTAAAGACTTGTTCAAACCAGACCCATTTCCGAAGCTACCTTCATCTTCAACATGTTCCCCAAAACTGGAACCACCAACAGAAAGTAGCTTTTTCAGTAACAGAGATGTGATGGAGAAGGAGACAATCCCAGCAGCTATATTTGGGGAAGGCTTCTTTTCATCGTCATCGTCGTCGTCTGCTGCTTCTATTTGTTCCAATAATGCTGCCCAAGAAGGCTTGTCTTTACCCTATTGTTGGAATGATTTTCTTCTTGAAGATGTTTTCCCACCTCCTGCTGCTGCTGCTGCTGATAACAACCTAGACAATGAAAATCCAACAACGAACGAGAATAAGAATGAGGTGACGTCACAGCAAGTCCCCAGCAGTGACGTTCTGTATTCGTCGTCGTCGTCATCCTCTGACATTTCATTCGTAGAAGCCATGCTTGATCAAGAAAATGAGATGTTTTTGAATTTCCCTCACTTGATGGAGGAACCCTCCACGTCCAACTACTGA 957 0.4472 MVRPPCCEKLGVKKKGVWTPEEDAKMIAFVSKHGSGNWTSVPKNAGLKRCGKSCRLRWTNYLRPDLKHDSFAPHEEDLILKLHAAIGSRWSMIAQQIPGRTDNDVKNYWNTKLKKKLTGMGIDPVTHKPFSKLLADYGNIGGIQKPSTRIGSLGKDLFKPDPFPKLPSSSTCSPKLEPPTESSFFSNRDVMEKETIPAAIFGEGFFSSSSSSSAASICSNNAAQEGLSLPYCWNDFLLEDVFPPPAAAAADNNLDNENPTTNENKNEVTSQQVPSSDVLYSSSSSSSDISFVEAMLDQENEMFLNFPHLMEEPSTSNY 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0990 318 Gene3D - 69 129 - -
Lele17g0990 318 MobiDBLite consensus disorder prediction 248 281 - -
Lele17g0990 318 SMART sant 14 64 IPR001005 -
Lele17g0990 318 SMART sant 67 115 IPR001005 -
Lele17g0990 318 CDD SANT 18 62 IPR001005 -
Lele17g0990 318 PANTHER F14D16.11-RELATED 1 314 - -
Lele17g0990 318 ProSiteProfiles Myb-like domain profile. 14 62 IPR001005 -
Lele17g0990 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 66 IPR017930 -
Lele17g0990 318 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele17g0990 318 CDD SANT 73 113 IPR001005 -
Lele17g0990 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Lele17g0990 318 Gene3D - 15 67 - -
Lele17g0990 318 FunFam transcription factor MYB80 70 130 - -
Lele17g0990 318 FunFam MYB-related transcription factor 14 67 - -
Lele17g0990 318 MobiDBLite consensus disorder prediction 253 281 - -
Lele17g0990 318 Pfam Myb-like DNA-binding domain 70 111 IPR001005 -
Lele17g0990 318 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Lele17g0990 318 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0990 Lele-ChrLele17 20742525 20744301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0990 1 312 MYB Transcription Factor Family AT3G28470 45.427 1.07e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele17g0990 Myb_DNA-binding 8.7e-15 CL0123