Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0987 ATGTCCGAAGGATCTCCCTCTCCTCCTCCGATTGCCGGCGAACCCGGTAACGGATCCTCGCCGGAACCAAATTCCGAAAACCATGTCCCTGATTCCCAAAACGGGGTTGCCACTTCTAAGGAAGAAACGACAACCGCTCCTACCACTACGAGGAGCAACCGGCCGTCGCGCGCGTGCACCATTCGCGCTGCGTCTCGTCTCTATTCATCGGTGCAGCCGGCGCTCCGACGGAAGTCCAAAGAGGCAAAGAAGGAGGAGAAGCAGGAGGACTCGCCGCTGCAGCAATGCAGCAAGATCGTGACGCCGTTAGTAGAACCGCCCCCACCTTCGCAGTTGCCTCGGTGGAACCTGCGGTCCATGTGGGAATTAGCTTCTGTACTCAATTTCTTGCATGTATTTAGGCCTCTCTTAAACATCTCAGTAGAATTCTCGGCTGAAGAATTTGAGACAGCTCTCCTTATGCCCAACGACACATTGAGTGATATACATATGCCGTTGTTAAAGGCAATCCCTCCCATTACAAGAATGGCTCTCACACGTGATACTTGGATAACTGTGTTATGCAGAAAATTGAGAGATTGGTGGTTTTGGGTTGCTGATGGGGATGTTCCAATTGTTGCTTCACATGGGGCGGAGGTTGAAGCTTATAAATCACTTGATCCCGGGGTCCGTGTTGTCATCTTAAAAGCTTTATGTGACATTCGTGTTGAGCAAGAAGATATCCGAAGTTACATTGACAACTCACTCAGACATGGCGTTCAACTATTAACATTTCGTAAAGAGCGTATTGGGGGTGATTCACATGGAATTTCTTATTGGTATGAAGATGACCCAATTATTGGTCATAGGTTATACCGTGAAACAAGGAAAACTGAAGTATTTCAGGTGAAGAAGGGGAAGGCAAAAGGTTCAAAGGTTGTTTCTAATACATCATATCAGTGGGAAGCTGTTGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTTGCTCAAGTAGAAATAGAACTGAGGCTTCTCTAGGGAAAAAGCTAAAGATAGACATGCTTCCTGAGATTGAGAAAGTTCACAAGAGGAAGGAGAGGTTGCTGAAAAAGCAACACAGACAGGCTCTTCTTCTTGATAATTTCTTAGGGGTTGATGGCCTTGCTACTGGGCGCTCCCTTCGTGATAGGAAGCCTGTTACTTACACATTTGATGATTATGATCGGTCCATCAATGAGGCGATTAAAGTAACCAAACAAAAACAGCCATCTCCAGAACCTATGTCTAGGAGAGATATAGTTGGAAAACACGAAACCTTGAGTAATGGTAGACGGAGTGGTCCTTCACATGCCTCAGAACATCTGAATTTTAGTATGCCATCTCCGAAGTCACCTGACTTTGATGATACTGAGGAAGAGCATGGATCTGAATTATTGGACCGAAGCAATCGGCGAAGACAGAGGCCCATGCGGTACTCGGAGAAAGAATTTGTTGAAGCATTATCAGATAACGAGGCAGACTATGACAGTGATGATGATATTGTTGGAGAAGTTGTATATGATGAAGAATATCTCAGGAAACGTAAGCAGAGAAGGAACCATTCTAGTAGCTCTGAGGGAGATGATGAATATCAGTGGGATGAAGACAATGTTGAAGAAGATGATGATGATGGAGATTCCTTGAGCATCAGTGAAGACAGTGACAAGCCTCGGAAATCTAAGCAATTGCCAGGTCGTACGAGAAGAGAAACTAAACTCAGGTCTGTAGATGAGATTAACATTGGTTTACGACGCAGCAAGAGGGCCACCAGAAACCGTATCAATTACCGTCAATATGAGATGTCAGAATCAGAGCCTGAGTTTATGAAACCTGAGAAGTCTAATGCTTCAGACAATCACTCAGGTCCCAGCGAAAATGGGGATTATATGATGGAAGATGAAGAAGATTCAGATGACAATGATGGAGAAGATCAGGAAACAAAAGAAGATAACGAGCCCCCTGCTTATGTTGCGGAGGAAGAGAAAGAAGAACAAAAGCAACCTCCTGAAAAATCAGATAGTCCTAACCAGGAGGAAGGTGAGGGCACAACAAAAAGACGTTTCCTTGATTTGAATGAGCTTGCCCCTACCTCGGGCTTTGACGATGGTCTAAACACAATAATGAAAGATGAGGATAATGATGTTCAAGCTTCCCCTTCTTAA 2190 0.4475 MSEGSPSPPPIAGEPGNGSSPEPNSENHVPDSQNGVATSKEETTTAPTTTRSNRPSRACTIRAASRLYSSVQPALRRKSKEAKKEEKQEDSPLQQCSKIVTPLVEPPPPSQLPRWNLRSMWELASVLNFLHVFRPLLNISVEFSAEEFETALLMPNDTLSDIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWFWVADGDVPIVASHGAEVEAYKSLDPGVRVVILKALCDIRVEQEDIRSYIDNSLRHGVQLLTFRKERIGGDSHGISYWYEDDPIIGHRLYRETRKTEVFQVKKGKAKGSKVVSNTSYQWEAVATNFDEFQDVSEKLCSSRNRTEASLGKKLKIDMLPEIEKVHKRKERLLKKQHRQALLLDNFLGVDGLATGRSLRDRKPVTYTFDDYDRSINEAIKVTKQKQPSPEPMSRRDIVGKHETLSNGRRSGPSHASEHLNFSMPSPKSPDFDDTEEEHGSELLDRSNRRRQRPMRYSEKEFVEALSDNEADYDSDDDIVGEVVYDEEYLRKRKQRRNHSSSSEGDDEYQWDEDNVEEDDDDGDSLSISEDSDKPRKSKQLPGRTRRETKLRSVDEINIGLRRSKRATRNRINYRQYEMSESEPEFMKPEKSNASDNHSGPSENGDYMMEDEEDSDDNDGEDQETKEDNEPPAYVAEEEKEEQKQPPEKSDSPNQEEGEGTTKRRFLDLNELAPTSGFDDGLNTIMKDEDNDVQASPS 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0987 729 MobiDBLite consensus disorder prediction 434 487 - -
Lele17g0987 729 MobiDBLite consensus disorder prediction 520 537 - -
Lele17g0987 729 MobiDBLite consensus disorder prediction 520 729 - -
Lele17g0987 729 MobiDBLite consensus disorder prediction 637 657 - -
Lele17g0987 729 PANTHER REMODELING AND SPACING FACTOR 1 50 688 IPR028938 GO:0006355|GO:0031213
Lele17g0987 729 MobiDBLite consensus disorder prediction 658 697 - -
Lele17g0987 729 MobiDBLite consensus disorder prediction 76 92 - -
Lele17g0987 729 MobiDBLite consensus disorder prediction 18 67 - -
Lele17g0987 729 MobiDBLite consensus disorder prediction 559 594 - -
Lele17g0987 729 MobiDBLite consensus disorder prediction 461 487 - -
Lele17g0987 729 MobiDBLite consensus disorder prediction 438 455 - -
Lele17g0987 729 MobiDBLite consensus disorder prediction 1 105 - -
Lele17g0987 729 Pfam DDT domain 125 170 IPR018501 -
Lele17g0987 729 MobiDBLite consensus disorder prediction 607 623 - -
Lele17g0987 729 MobiDBLite consensus disorder prediction 538 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0987 Lele-ChrLele17 20720096 20727028 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Lele17g0987 DDT 1.4e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0987 17 20720096 20727028 Lele19g0572 19 3281942 3287618 hybridization
Lele17g0987 17 20720096 20727028 Lele20g0881 20 15287927 15292036 hybridization