Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0985 ATGGACCTTCTTGCGCCGGATAAGGATGAGAATCTTGAACATGACGCGTCGGATTTTGTCTCCCGAGTTCGACTCGTCGATGCTCCTATACTCTTATTTGTTTGCTTCCACGAGGCTCTGCGCGGAGAACTCAACGAGCTTCGGAGCTTGGCGGAAACGTCGTCGCTGGAGAATGCATCGCACAACCCCGAGCTTATTCTCAAACTTCAACGAAGATTCGAGTTTCTCAAATTAGTTCTCAAGTATCATTGCGTCGCGGAAGACGAGCTTATCTTCCCTGCATTGGATGTACATGTAAAAAATGTGGTATGTACTTATTCCCTTGAACATAATAGCACCGATGAAGCCTTCAACTCAATCTTTCACTATTTAGATGAGTTGATGGATCCAAATAAGAATATTTCCAAGCTGTTTCAAGAACTTATATGCTGCATTGGAATCTTGCAAGTCACCACATTCCAGCATATGCAGAAGGAAGAAGAGCAGGTTTTTCCTCTCTTAATGCAGAAAGTTTCTATCGAAGAACAGGCTTTGCTGGTCTGGCAATTCATATGCAGTGTTCCTATAATGTTGCTTCAGGAAATTTTGCCATGGATGGTATCATTCCTTTCTGCAGACAAACAAGCAGAAGTTCGAAAGTTTTTAAACGAAATTACACCAATGGAGAAAGAACTGCAAGAGGTTTTGATTGCTTGGCTTGGTAGCAACACCCAAATCATCACCGAGGACTGTTCTCTGAATGAAGTTGATCAATGTGCTGACGGATTCCCACATATGAAAGGACCACGCGGGTTGAGTTATTGCAATAGGAATTTTAAAGCCATTTCAAATCAGATGAAAGCAAATTGTTCAGACGTAGAAGATAGAGCCAATGAAGTTAATGTTCTTTATCTATGGCATAATGCCATCAAGAAAGATATGAAAGAAATGTTAGAAGAACTTCATCAAATCAGAAAAAACACTTGTTTTCATAATTTGGATTCTTTACTCATCCAACTAAAATTCTTTGCTGAAGTTCTCGTCTTCTACAGCAAAGCTCAGAAGAAATTCTTTTACCCAGTTTTGAGTGAACTTGCTTATGGCTTGTTGACAAAGTCTAGTGAACAATTTCTTGGTGAAAGTCATATTGAAGATTTACAGCACTTGCTGTTGTATAATGCTGAAAGCGTTATGCCTTTGTCTGAATTTGTGGAGAAGCTTTGCAGAGACCTTGAACTATTTATGACACGAATCAACAAGCAATTTGCTTTTCAAGAAACTGAGATATTTCCTGTCATTCGTTTGAATCGCAACAATGAAATGCTAGAGGAACTCATCAGCTTGAGCCTGCACATGATGCCACTTGGGTTGCTGAAATGCGTGATAACTTGGTTCTCAGGTCACTTATCTGAAAATGAATCTAGATCCATTCTCAGTGCCATGAAACAAGGAAATCCTTTTGTCCATGAAGCTTTTGCATCACTAGTACAAGAGTGGTTCCGTGTTGGTTATTCTGGTAAAATTTCTACGGAAAAATTCCGACAAGACTTGCGACATATTTTTAAAAGCAAAAACTCTTTGTTAACTGAGCAAGTCAAGGAAGCTCCCGGGTTTTCTTTCTTGAATTATGACAAGCCTCATAAAGGATCAGTTGGAAATAATGGTTTGTCTTCTTCATCATCTTCTGGATTCAACAATGTGACCAAGTATGAGACACCATACTCTACAGGACTTAATATGCATATATTTTTTCCTGCCACAGTTATGAAGTTAAATCACCGTTCCATATTTCAGGCGGCTGATAGTTCTAGTGCTCCCTTCCTTGATGATTCAAAACCTATTGACCTTATATTTTTCTTTCACAAGGCTATAAAGAAAGACTTGGATTACCTTGTTCTTGGATCATCTCATATAGAAAAAAATGTTGAGATGCTTGTGAATTTCAGCAAAAGATTTCATCTAATATGCTTTCTTCATCGAATCCATAGTGAGACAGAGGATGAGATAGCATTCCCAGCCTTAGAGGCAATGAGTAAAGTGAAAAACATTAGCCTCTCTTATACGATTGATCACAAATTTGAAGTTGACCACTTCAACAAAATATCCTGCATCCTTGATAAGATGTTCGATCTACATTTTTCAGTTTCTAGTTTTGAAACAAATACGTGGGAGCAGAGAATGCTAATGCATCATCAACTGTGCAGAAAGCTGCAGGAAATGTGCAAATCAATGCATAAACTACTTTCTGATCATATGAATCGTGAAGAAATTGAAATTTGGCATTTAATTAGAGAATTCTTCTCCAATAAGGAGCAAATAAAGATCGTAGGGTGCATGCTTGGAAGAATTCGAGCAGAAATATTACAAGATATGATACCCTGGTTGATGACATCTTTAACCCCAGAGGAACAGCATGTTTTAATGTTCTTATGGTCCATGATTGCCAAAAATACAATGTTTGATGAGTGGCTAGCTGAATGGTGGGATGGATATAGGATAACAAAGGAGATAGAAAGATCAAATGATCCTCCTCTGCAGACTGTTGAGCCGTTGGAGATCATATCTAAATATTTATCTAAAGAAGCTCTCGATGAACTCCAAGAAGAATCCTCTTCCAACAAAAGCGAATTTTCTTCACAGAGGGATTATGTTGGTGATAATAATGAGCAGCCTCACAATTGCAATCGTCATGGCAAATCCCAGGTTCGTAAAGCAAAGAAGATTGGTAGTGAATGTTCAGAATGCAGAAACCAATTGAGTGATATTAACAAAACATGCACTGCAGTAACAGATATCACAAGTCCGATCAATGATAAAGGTCACTCTCTTCAATTCGGTGAAAACTCTGGGCACTATGACCATCTTATGAAAATAAGTCCAGATGATCTGGAGATTGCCATAAGAAGGATATCTCGTGACTCTTCCTTAGATCTGCAGAAGAAGTCATACATAATCCAGAATCTGCTGATGAGCCGTTGGATTGTTAAACAGCATATCTCTTGTTCGGAAGGCACTGTCACAAACAATGGGCAGCAATTTCCTGGGCAGTATCCGTCTTACAGGGACCCTCTCAACGTAATCTATGGCTGCAAACACTACAAGAGAAGCTGTAAGCTTTTAGCTTCCTGTTGCAACCAACTTTATACATGCATTCATTGCCATAATGATGCATCAGATCATTTAATTGACAGGAAATCTATTACAAAGATGATGTGCATGAAGTGCTTGAAGGTTCAGCCAATCGGTGCCACATGTTCAACTGTATCTTGCGGTAACTTACCCATGGCAAAATACTACTGCAGGATCTGTAGGTTGTTCGATGATGATAGGGAAATTTACCACTGTCCCTATTGTAACCTGTGCCGAGTTGGAAAGGGCTTGGGCTTAGACTACTTTCATTGTATGAATTGCAATGCTTGTATGTCTCGTTCCCTTATAGTACATATATGCAGAGAGAAATCTTTAGAGGACAACTGCCCAATTTGTCATGAATACATCTTTACGTCCTGCTCTCCAGTAAAGGCCCTTCATTGCGGTCATGTCATGCACTCAACATGTTTTCAGGAGTATACCTACTTCAATTATACCTGTCCAATATGTTACAAGTCACTTGGAGACATGCAGGTGTATTTTAGGATGTTAGATGCGTTATTGGCTGAAGAGAAAATGCCAGACGAGCATTTGGGTCAAACTCAGATGATACTATGCAATGACTGTGAAAAGAAAGGAACAGCTCCATTCCACTGGCTTTACCACAAATGCTCTTCTTGCGGGTCCTACAACACCAGAAGTTTCAAACATTTTTGCATGTGTATCGATCTCAACCATATCCCTCCTCCAATTAATGCCAAGAAGAATGGGAAGTTACCAGAAATTCTGTCAATCTGGATGCTATTGGCTAAAACTCACGAATCCATTCAATTGGTGATAAACAAGTGCAGGATTGCCTACACCATCGATTACATCAAAAAAGTGGACTCATCATCTCATCGTAATATTCTCCGACAACTTTTTGCTCCAGTGGCTGCGAGGAAACCAAATGCATGGCCATGGCCATGGAATCTCCATTATCGTCTTGGCAGGGATGCTGATGGACCCACAAGCTATTTGGTGTAA 4095 0.3956 MDLLAPDKDENLEHDASDFVSRVRLVDAPILLFVCFHEALRGELNELRSLAETSSLENASHNPELILKLQRRFEFLKLVLKYHCVAEDELIFPALDVHVKNVVCTYSLEHNSTDEAFNSIFHYLDELMDPNKNISKLFQELICCIGILQVTTFQHMQKEEEQVFPLLMQKVSIEEQALLVWQFICSVPIMLLQEILPWMVSFLSADKQAEVRKFLNEITPMEKELQEVLIAWLGSNTQIITEDCSLNEVDQCADGFPHMKGPRGLSYCNRNFKAISNQMKANCSDVEDRANEVNVLYLWHNAIKKDMKEMLEELHQIRKNTCFHNLDSLLIQLKFFAEVLVFYSKAQKKFFYPVLSELAYGLLTKSSEQFLGESHIEDLQHLLLYNAESVMPLSEFVEKLCRDLELFMTRINKQFAFQETEIFPVIRLNRNNEMLEELISLSLHMMPLGLLKCVITWFSGHLSENESRSILSAMKQGNPFVHEAFASLVQEWFRVGYSGKISTEKFRQDLRHIFKSKNSLLTEQVKEAPGFSFLNYDKPHKGSVGNNGLSSSSSSGFNNVTKYETPYSTGLNMHIFFPATVMKLNHRSIFQAADSSSAPFLDDSKPIDLIFFFHKAIKKDLDYLVLGSSHIEKNVEMLVNFSKRFHLICFLHRIHSETEDEIAFPALEAMSKVKNISLSYTIDHKFEVDHFNKISCILDKMFDLHFSVSSFETNTWEQRMLMHHQLCRKLQEMCKSMHKLLSDHMNREEIEIWHLIREFFSNKEQIKIVGCMLGRIRAEILQDMIPWLMTSLTPEEQHVLMFLWSMIAKNTMFDEWLAEWWDGYRITKEIERSNDPPLQTVEPLEIISKYLSKEALDELQEESSSNKSEFSSQRDYVGDNNEQPHNCNRHGKSQVRKAKKIGSECSECRNQLSDINKTCTAVTDITSPINDKGHSLQFGENSGHYDHLMKISPDDLEIAIRRISRDSSLDLQKKSYIIQNLLMSRWIVKQHISCSEGTVTNNGQQFPGQYPSYRDPLNVIYGCKHYKRSCKLLASCCNQLYTCIHCHNDASDHLIDRKSITKMMCMKCLKVQPIGATCSTVSCGNLPMAKYYCRICRLFDDDREIYHCPYCNLCRVGKGLGLDYFHCMNCNACMSRSLIVHICREKSLEDNCPICHEYIFTSCSPVKALHCGHVMHSTCFQEYTYFNYTCPICYKSLGDMQVYFRMLDALLAEEKMPDEHLGQTQMILCNDCEKKGTAPFHWLYHKCSSCGSYNTRSFKHFCMCIDLNHIPPPINAKKNGKLPEILSIWMLLAKTHESIQLVINKCRIAYTIDYIKKVDSSSHRNILRQLFAPVAARKPNAWPWPWNLHYRLGRDADGPTSYLV 1364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0985 1364 CDD Hr-like 608 753 - -
Lele17g0985 1364 Gene3D nmb1532 protein domain like 28 185 - -
Lele17g0985 1364 Gene3D nmb1532 protein domain like 288 441 - -
Lele17g0985 1364 Gene3D nmb1532 protein domain like 604 774 - -
Lele17g0985 1364 SMART ring_2 1152 1193 IPR001841 -
Lele17g0985 1364 Coils Coil 300 320 - -
Lele17g0985 1364 SUPERFAMILY Zinc hairpin stack 1089 1139 IPR037275 -
Lele17g0985 1364 Pfam Hemerythrin HHE cation binding domain 37 167 IPR012312 -
Lele17g0985 1364 Pfam CHY zinc finger 1023 1098 IPR008913 GO:0008270
Lele17g0985 1364 CDD RING-H2_Pirh2 1151 1194 - -
Lele17g0985 1364 Gene3D - 1223 1266 - -
Lele17g0985 1364 SUPERFAMILY CHY zinc finger-like 1014 1079 IPR037274 GO:0008270
Lele17g0985 1364 Pfam Ring finger domain 1150 1193 IPR001841 -
Lele17g0985 1364 MobiDBLite consensus disorder prediction 858 895 - -
Lele17g0985 1364 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1145 1195 IPR013083 -
Lele17g0985 1364 SUPERFAMILY RING/U-box 1151 1201 - -
Lele17g0985 1364 ProSiteProfiles Zinc finger CHY-type profile. 1016 1085 IPR008913 GO:0008270
Lele17g0985 1364 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 651 1259 - -
Lele17g0985 1364 Pfam Zinc-ribbon 1199 1256 IPR039512 -
Lele17g0985 1364 CDD Hr-like 36 165 - -
Lele17g0985 1364 ProSiteProfiles Zinc finger RING-type profile. 1152 1193 IPR001841 -
Lele17g0985 1364 FunFam Zinc finger protein-related isoform 1 1147 1196 - -
Lele17g0985 1364 ProSiteProfiles Zinc finger CTCHY-type profile. 1088 1151 IPR017921 -
Lele17g0985 1364 MobiDBLite consensus disorder prediction 865 888 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0985 Lele-ChrLele17 20701723 20711917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0985 28 849 C2H2 Transcription Factor Family AT3G18290 31.951 2.96e-119 401