Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0967 ATGGAGTTTGCTCTGCGCAGATCTGGCCCACAAGAAGGTGAACCAGTCAAGGAAGAGAAGAGAACCGAATCTACTGCTTCTCATAATCATGAAGCTCCTTCTCATCTCAAAGAAGATACTACTGTTGTCGAGGTGGCACCGATGAATAGATCCGTGGTGGACACTGGACCACCTCATGCATCCTCAGCCAAAAAGGAAGAGGTTGATGAACTTGAATCAGCAAGAGTTGAAATGGGTGAGGTGAGAGAAGAAAATCAAAGGCTAAAGATGTGTTTGGACCGAATCATGAAGGAATATCAGGCTCTGCAAATGCAATTCCACGTTATGGCTCGACAAGAAGAAGCCACCACCGCGAAATCTTGTGATCAAAACAATCAAGAGCCACCAGCTGAGGAATCCGATCTGGTCTCACTCAGTCTTGGCCCAAAATCTGTCGAAAAACCTAAAGTCACCGGCTCCAAACCACCATTGTTACATTTACAGCGACAAGGAGGAGGAGGAGGAGGAGGAGAATTGAAACAAGACTTGGCTCTTGGACTGGATTGCAAATTTGAAACATCAAAATCTGGAACCACCACTGAAGCTTTGCCAAATAATGCAAGCCCCACCAATAGCTCTGAATTGGTTCATCACAATAAGGAAGAAGCTGGCGAGAGTTGGCCCCCAAGTAAGGCACTTCATAACAAAACTCCCAGAGATCCAAGCACAGATCAAGATGAAGTTTCCCAACAAAATCCTGCTAAGAAGGCCAGAGTCTGTGTTAGAGCAAGATGTGACACGCCAACTATGAATGATGGATGCCAATGGAGGAAATATGGACAAAAAATATCCAAGGGAAATCCTTGTCCAAGAGCTTACTATCGTTGCACAGTTGCACCAAATTGTCCCGTCAGAAAGCAGGTGCAAAGATGTGCAGAGGACATGTCGGTTCTAATCACTACCTATGAAGGGAACCATAACCACCCTCTTCCTCTCTCTGCTACTGCTATGGCTTCCACCACTTCTGCAGCTGCTTCCATGCTCTTGTCTGGTTCATCTTCAACCTCTAATCTCCCTGGTTCAGTGCCGTCTTCAGCAGCCTCCGCCGCCATTGGCTCTGATCTTCACGGCATCAACTTCTATCTCGCAGATGGCTCCAAACCAAAGCAATTCTACGTGTCCAATCCTGCACTATCACCTTCACCATCACACCCAACAATTACCCTCGACCTCACTTCCAATCCTTCCTCTTTAAATTATTTCTCTTCCAACTTCAACAGATTCAACTCAAACTACAATAACAACCCACCCAGATTCCCTTCCTCAACCAGTACCCTCAGCTTCAGTTCCTCAGAATCCAATGCAATGTCATGGAGCAACAATGCGGGGTTCCTCGCTTACAACTACAACACTCAGCCATATAACAACAACAGGAACATCCTTAGCAGCATCAACCTCGGAAGACAACTAACGATTCAAACTCCTCCTCCTCCTCCTCCTCCTCAAGTACATCAAAATCCTTCACTGCCAGACACCATTGCTGCTGCAACTAAAGTTATCACAGCTGACCCAACTTTTCAGTCAGCTTTGGCTGCGGCACTTACTTCCATTATCGGCACAGGAAATAGTAGTGGTAGTGTTAGTGGGAATAGCACACAATGCGTTGGAGAAATCAACTTGGGTCAGAACATTAACCTATGGGGAGATATTTTTGCATCTGGGTCAGCTTCCAAAGTCACCGGACGTGGTTCAAGCTTCTTGAGTAGTAAAACGACGCCGGCCGGAACACAAGCTACAGGAAGTAGTGGTTTGATGTTTCTGCCTCCATCTTTGCCATTTTCTAGCTCGAAGACCGCGTCTGCATTATCTCCGGCTGATAATAGAGACAAGTCGAATTCGTGA 1881 0.4631 MEFALRRSGPQEGEPVKEEKRTESTASHNHEAPSHLKEDTTVVEVAPMNRSVVDTGPPHASSAKKEEVDELESARVEMGEVREENQRLKMCLDRIMKEYQALQMQFHVMARQEEATTAKSCDQNNQEPPAEESDLVSLSLGPKSVEKPKVTGSKPPLLHLQRQGGGGGGGELKQDLALGLDCKFETSKSGTTTEALPNNASPTNSSELVHHNKEEAGESWPPSKALHNKTPRDPSTDQDEVSQQNPAKKARVCVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPNCPVRKQVQRCAEDMSVLITTYEGNHNHPLPLSATAMASTTSAAASMLLSGSSSTSNLPGSVPSSAASAAIGSDLHGINFYLADGSKPKQFYVSNPALSPSPSHPTITLDLTSNPSSLNYFSSNFNRFNSNYNNNPPRFPSSTSTLSFSSSESNAMSWSNNAGFLAYNYNTQPYNNNRNILSSINLGRQLTIQTPPPPPPPQVHQNPSLPDTIAAATKVITADPTFQSALAAALTSIIGTGNSSGSVSGNSTQCVGEINLGQNINLWGDIFASGSASKVTGRGSSFLSSKTTPAGTQATGSSGLMFLPPSLPFSSSKTASALSPADNRDKSNS 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0967 626 FunFam probable WRKY transcription factor 31 248 325 - -
Lele17g0967 626 ProSiteProfiles WRKY domain profile. 258 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele17g0967 626 MobiDBLite consensus disorder prediction 116 132 - -
Lele17g0967 626 MobiDBLite consensus disorder prediction 575 596 - -
Lele17g0967 626 SMART WRKY_cls 263 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele17g0967 626 MobiDBLite consensus disorder prediction 60 84 - -
Lele17g0967 626 MobiDBLite consensus disorder prediction 607 626 - -
Lele17g0967 626 MobiDBLite consensus disorder prediction 113 172 - -
Lele17g0967 626 Pfam WRKY DNA -binding domain 264 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele17g0967 626 Gene3D WRKY domain 247 325 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele17g0967 626 MobiDBLite consensus disorder prediction 1 84 - -
Lele17g0967 626 MobiDBLite consensus disorder prediction 188 207 - -
Lele17g0967 626 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 37 544 IPR044810 GO:0003700
Lele17g0967 626 MobiDBLite consensus disorder prediction 213 250 - -
Lele17g0967 626 Coils Coil 64 84 - -
Lele17g0967 626 MobiDBLite consensus disorder prediction 11 38 - -
Lele17g0967 626 CDD bZIP 64 98 - -
Lele17g0967 626 SUPERFAMILY WRKY DNA-binding domain 256 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0967 Lele-ChrLele17 20594779 20597934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0967 78 533 WRKY Transcription Factor Family AT5G15130 42.340 2.72e-83 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele17g0967 WRKY 6e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0967 17 20594779 20597934 Lele19g0593 19 3411781 3414879 hybridization
Lele17g0967 17 20594779 20597934 Lele20g0854 20 15152925 15156673 hybridization