Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0962 ATGTGGCAGATCTTGTGGCTCTTAGCAAATTGCTACTTTGATTTGAGGACATGCTTTAATTTACTTCGTTTTTCGTCCTACCAGTCCATTGGAAGTCCTGAACTATGTTGTCCGGATCTCACAATGGGCAAGTCACCAGGAAAATGGATCAAAACTGTACTGTTTGGAAAAAAGTCGTCCAAATCAAATATTTCCAAAGGAAGAGAGAAACTTGTTAACCAGAAAGAAGCATTGGTTGCTTCCAAGGCATCAGAAACCGGTGTGGCTTTAGAACCACCCCCCTATACTGATGCCAGAAATGAGGAAGAGTTGGAATTGGATAATAAAGAAGCAGAAAATCTTTCTCCTATGAATCAGGAAACGGATTTGGTGCCACATGTTGATCAAGACGCACCACCTGATCCGGAGAAAATCAGGCAGGAGGAAGCTGCAACAAAGGCACAGGCTGCTTTTAGGGGTTATTTGGCTCGCAGGGCATTCAAGGCCTTAAAAGGCATAATAAGGTTGCAAGCTCTTATTCGTGGGCACTTAGTTCGAAGACAAGCTGTTGCTACATTATGTTCCATGTATGGGATAGTCAAATTTCAGGCTTTTGTTCGGGGAGGAAGTGTTAGACAGTCTCATGCTGGTTATGAAATCCGTGAGAAGTACAATATTTTGAAGCTTCAGGATGGAAAGAGTACCAATCCAGCTGATATAGCCACAAAATTTGCAAGGTTATCAACAAATACTTACACCCGCAAGCTTATTGCATCATCTACCACGATAATGGCCTTGCGCCTGCAATATGTTCCTGGTGATCCGAATTCAGTGTTGAGTTGGTTGGAGCGCTGGTCTGCATCTCACTTTTGGGTACCGATTCCTCAACCCAAGAAAATTCCAGACTCTAGGTCTCGGAGAAAGCAAGCTGGAGAAGTTCAAATGAGCAAGTCAAGACGAACTAACCGGAAGCTTCCAACTGTAAATTCTGACTCAGTCCCAGGGCAAGCAAATCCTGAATTTGAGAAACCAAAAAGAAGCGTGAGGAAAATTTCAAACCAAGCTGCAGATCCAGTGCAAGAAAATCCACAAAATGAGCTTGAAAAGGTTAAGCGGAGCCTAAGAAAGGTCCATAACCCTGTTGTTGAGAATGCTGTTCCACCAGAAGTTGAATCTGAGACCCCAAAACAGCAATTGGAAAAGGCAAATATTACCTCAGAACATATTGTTTCAGAGCAAGAGGCTGTTAGCTCTAATGAAATATCTAACAGAGAACCAGCATTGGCTGAGCATGTGCTCAATGTACCTGATGTGGAAATTACTCCTAGACCTTCGGTTAGCAAGGAGGTGTCTGAAATGTCAGGCGGCTATCAAGTGGAATTGGATCCAAAGCCCTCCGTAGAGAATACATGTAAAGATAAAATTACTTCTGGTGATGAAGTTTTAAATGAGCCAAAAGATCTACCAGAGAGTGGTTGTAAAGATGAAAATTCTCCCCTAGCAAATGGGGATCTGAATCATAAGGAAGATCCAACAGGCAATGAAAACCAGAGACCCTCCCAGCGAACCTCAGTTCCAGGGAAACAGGAACGTGCAGAGAATGGTATACAGAGTAGTCCAACATTACCAAGCTATATGGCAGCAACTGAATCAGCCAAGGCCAAGTTGAGGGCACAAGGGTCACCAAGGCTTGGACAAGATGGTGGCGAGAGAAACAACTCTGCACGGAGACATTCTTTGCCATCCTCAACTAACAGCAAAATTAGTTCGCATTCACCAAGGACACAGAGACCAGTTCAACCAGGCAGCAAAGGGGGACACAAAACTGTCTCATCTAAAGATGGAAATGGAAGAGTAATTCAAGCCGAGTGGAGGAGGTGA 1860 0.4382 MWQILWLLANCYFDLRTCFNLLRFSSYQSIGSPELCCPDLTMGKSPGKWIKTVLFGKKSSKSNISKGREKLVNQKEALVASKASETGVALEPPPYTDARNEEELELDNKEAENLSPMNQETDLVPHVDQDAPPDPEKIRQEEAATKAQAAFRGYLARRAFKALKGIIRLQALIRGHLVRRQAVATLCSMYGIVKFQAFVRGGSVRQSHAGYEIREKYNILKLQDGKSTNPADIATKFARLSTNTYTRKLIASSTTIMALRLQYVPGDPNSVLSWLERWSASHFWVPIPQPKKIPDSRSRRKQAGEVQMSKSRRTNRKLPTVNSDSVPGQANPEFEKPKRSVRKISNQAADPVQENPQNELEKVKRSLRKVHNPVVENAVPPEVESETPKQQLEKANITSEHIVSEQEAVSSNEISNREPALAEHVLNVPDVEITPRPSVSKEVSEMSGGYQVELDPKPSVENTCKDKITSGDEVLNEPKDLPESGCKDENSPLANGDLNHKEDPTGNENQRPSQRTSVPGKQERAENGIQSSPTLPSYMAATESAKAKLRAQGSPRLGQDGGERNNSARRHSLPSSTNSKISSHSPRTQRPVQPGSKGGHKTVSSKDGNGRVIQAEWRR 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0962 619 MobiDBLite consensus disorder prediction 509 539 - -
Lele17g0962 619 MobiDBLite consensus disorder prediction 313 329 - -
Lele17g0962 619 ProSiteProfiles IQ motif profile. 140 168 IPR000048 GO:0005515
Lele17g0962 619 MobiDBLite consensus disorder prediction 459 486 - -
Lele17g0962 619 Pfam IQ calmodulin-binding motif 164 181 IPR000048 GO:0005515
Lele17g0962 619 Pfam IQ calmodulin-binding motif 142 161 IPR000048 GO:0005515
Lele17g0962 619 PANTHER IQ-DOMAIN 5-RELATED 42 582 - -
Lele17g0962 619 SMART iq_5 139 161 IPR000048 GO:0005515
Lele17g0962 619 SMART iq_5 162 183 IPR000048 GO:0005515
Lele17g0962 619 MobiDBLite consensus disorder prediction 83 105 - -
Lele17g0962 619 ProSiteProfiles IQ motif profile. 164 191 IPR000048 GO:0005515
Lele17g0962 619 MobiDBLite consensus disorder prediction 433 619 - -
Lele17g0962 619 MobiDBLite consensus disorder prediction 293 312 - -
Lele17g0962 619 MobiDBLite consensus disorder prediction 289 340 - -
Lele17g0962 619 Pfam Protein of unknown function (DUF4005) 522 598 IPR025064 -
Lele17g0962 619 Gene3D - 138 189 - -
Lele17g0962 619 MobiDBLite consensus disorder prediction 568 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0962 Lele-ChrLele17 20574783 20579629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0962 42 619 IQD Protein Family AT1G74690 43.750 1.79e-126 383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0962 17 20574783 20579629 Lele19g0598 19 3429270 3437092 hybridization
Lele17g0962 17 20574783 20579629 Lele20g0850 20 15133968 15139457 hybridization