Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0951 ATGGAGGGTGGTGATGATCTCCACCACCAACAACACCACCGTCCCAACTTCCCATTTCAGCTTCTCGAGAAGAAAGAAGATCACCACCAGGAGCCTGCTTCTTGTTCTACTTCTTCCTCTTACCCTTCTTTAGCCATCTCCGCCGAGCCCACCACCTCCAATTCCAACCGATCCAACCAGGTTCTTAACGTCGTCCCTCCCACCTCTTCCCCCTCCGAGCCCTCCAATAAGAGGCCACAGCCTAAGAGAACTTCCACCAAGGACCGCCACACCAAGGTCGACGGTCGCGGCCGCCGTATCCGAATGCCCGCGCTTTGTGCTGCTCGCGTCTTCCAGCTCACCCGCGAGCTCGGCCATAAGTCCGATGGCGAAACCATCGAGTGGCTGCTCCAACAGGCTGAGCCCGCCGTCATCGCTGCCACCGGCACTGGAACGATCCCCGCTAATTTCACTTCCCTTAATATTTCTCTGAGAAGCTCCGGCTCGACCATGTCCGTCCCTTCTCAGCTCAGATCGTCTTACTTCAATCCCAACTTCTCGGTTCAACAGCGGAGAAGCTTCTTCCCCGGAATCGGCTGGTCTTCCGATGGCAACAACACTTCAACGCTGCTGAATTTTCAGTCTAATAGTTTCTCAGGCGGTAGCATGTTGCAAGCAAAGCAGGAATTGCGCGGAGGCGAGGGTGGTGTTCCGTCCTCCTCGACGACGTTGGATTTAACTGAGGCGGAAGAAGGTATGGCGAGGAAAAGGAGGCCGACGGAACAAGAGTTGTCGCCATCTACTTCAGCACAACAATATCAAATGGGAAGTTATTTGTTGCAATCGAGCGCGGGGGCGATTACGACGAGCCACGCGCAGATTCCGGGGAATATATGGATGGTGGCGAATTCGAATAATCAAGTTATGAGCGGGGATCCTGTATGGACGTTCCCGTCGGTGAATAATAGTGCTTTGTACAGAGGCGCCACCATGTCCAGTGGGTTGCATTTTATGAACTTCCCTACTCCTATGGCGTTGTTGCCCGGTCAACAATTAGGATCGTCTGGGATTGGCGGAGGCGGAGCTGGGAACATAAACGAGGGACATTTGAGTATGCTTGCCGGCGTCAACCCATACCGGCCAGTGAGTGGAGTATCGGAGTCTCAGGCAAGTGGGTCTCAATCACATCATGGTGGTGGAGGAGGCGGCGATGATCGACACGATACAAATAGTCACCGCTCCTAG 1224 0.5433 MEGGDDLHHQQHHRPNFPFQLLEKKEDHHQEPASCSTSSSYPSLAISAEPTTSNSNRSNQVLNVVPPTSSPSEPSNKRPQPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSVPSQLRSSYFNPNFSVQQRRSFFPGIGWSSDGNNTSTLLNFQSNSFSGGSMLQAKQELRGGEGGVPSSSTTLDLTEAEEGMARKRRPTEQELSPSTSAQQYQMGSYLLQSSAGAITTSHAQIPGNIWMVANSNNQVMSGDPVWTFPSVNNSALYRGATMSSGLHFMNFPTPMALLPGQQLGSSGIGGGGAGNINEGHLSMLAGVNPYRPVSGVSESQASGSQSHHGGGGGGDDRHDTNSHRS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0951 407 MobiDBLite consensus disorder prediction 1 97 - -
Lele17g0951 407 ProSiteProfiles TCP domain profile. 86 140 IPR017887 -
Lele17g0951 407 MobiDBLite consensus disorder prediction 1 32 - -
Lele17g0951 407 MobiDBLite consensus disorder prediction 80 97 - -
Lele17g0951 407 Pfam TCP family transcription factor 84 250 IPR017887 -
Lele17g0951 407 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 27 392 IPR005333 GO:0003700
Lele17g0951 407 MobiDBLite consensus disorder prediction 222 263 - -
Lele17g0951 407 MobiDBLite consensus disorder prediction 375 389 - -
Lele17g0951 407 MobiDBLite consensus disorder prediction 393 407 - -
Lele17g0951 407 MobiDBLite consensus disorder prediction 33 79 - -
Lele17g0951 407 MobiDBLite consensus disorder prediction 374 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0951 Lele-ChrLele17 20520375 20521598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0951 77 401 TCP Transcription Factor Family AT3G47620 44.417 1.89e-62 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele17g0951 TCP 2.3e-38 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0951 17 20520375 20521598 Lele20g0840 20 15080256 15081509 hybridization