Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0948 ATGTATGTCATGGGAAGGCCACCTTGCTGCGACAAAATTGGGATCAAGAAGGGCCCTTGGACTCCCGAGGAAGACATCATTTTGGTCTCTTATATTCAAGAACACGGACCTGGAAATTGGAGATCTGTTCCCACTAAAACAGGTCTGATGAGATGCAGTAAAAGTTGCAGACTTCGATGGACCAACTATCTTCGTCCTGGTATCAAAAGAGGCAACTTCACCGATCATGAGGAGAAGATGATCATCCATCTCCAAGCTCTGCTAGGAAACAGATGGGCTGCGATAGCTTCGTATCTTCCACAGAGGACGGACAATGACATAAAGAATTATTGGAACACCCATTTGAAGAAGAAGCTGAAGAGGCTCCAAACTGGGAGTGATGGCGACGACCAAGAAGATGACTCGGCGGCACAGCCCAAGGGCCAGTGGGAGAGAAGGCTTCAGACAGATATCCACACGGCCAAACAGGCTCTGCACGAGGCTCTGTCCCTCGACAAGCCAACTGAAACCGAAAACAGGCCCTTCAGTCCCACAATCCAAACATGCCCTTACGCATCAAGCACAGAAAACATAGCCCGATTACTCCAGAACTGGATGAACAAATCCCCAAAGGACCAAGCACAACCAGGAGTTAGCTTCTTCAACAGTGGCACAACAGGTTCCAGTTCGTCGAGCGAAACGGCGACGTATAGGAACACCAATGTTCTAGATTCTCTATGGAGCTTCAACTCTGATGCTTCTCAACAATCTGCGTCCGTGGACGACAGCACCAACAACAGCATGTTCCAAGACGAAAGCAAGCCGACGATCTCGGAGTCGCAGCATCAGCTTCCTCTGACTCTAATCGAGAAGTGGCTCCTCTTCGACGATGGCGTAGCTCAGAACCAGGATGATGACCTAATCAGCGACTCGCTTCTGGAACAAACCACTCCGCAATTGTTCTAG 945 0.4952 MYVMGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTKTGLMRCSKSCRLRWTNYLRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKRLQTGSDGDDQEDDSAAQPKGQWERRLQTDIHTAKQALHEALSLDKPTETENRPFSPTIQTCPYASSTENIARLLQNWMNKSPKDQAQPGVSFFNSGTTGSSSSSETATYRNTNVLDSLWSFNSDASQQSASVDDSTNNSMFQDESKPTISESQHQLPLTLIEKWLLFDDGVAQNQDDDLISDSLLEQTTPQLF 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0948 314 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Lele17g0948 314 MobiDBLite consensus disorder prediction 122 144 - -
Lele17g0948 314 CDD SANT 19 64 IPR001005 -
Lele17g0948 314 MobiDBLite consensus disorder prediction 161 182 - -
Lele17g0948 314 FunFam Transcription factor MYB30 71 129 - -
Lele17g0948 314 CDD SANT 72 115 IPR001005 -
Lele17g0948 314 Pfam Myb-like DNA-binding domain 70 115 IPR001005 -
Lele17g0948 314 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Lele17g0948 314 FunFam MYB-related transcription factor 16 69 - -
Lele17g0948 314 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Lele17g0948 314 MobiDBLite consensus disorder prediction 202 227 - -
Lele17g0948 314 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 248 - -
Lele17g0948 314 Gene3D - 71 160 - -
Lele17g0948 314 MobiDBLite consensus disorder prediction 249 274 - -
Lele17g0948 314 SUPERFAMILY Homeodomain-like 14 111 IPR009057 -
Lele17g0948 314 SMART sant 16 66 IPR001005 -
Lele17g0948 314 SMART sant 69 117 IPR001005 -
Lele17g0948 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 119 IPR017930 -
Lele17g0948 314 Gene3D - 16 69 - -
Lele17g0948 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 68 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0948 Lele-ChrLele17 20492539 20493687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0948 4 290 MYB Transcription Factor Family AT5G62470 52.478 9.43e-105 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele17g0948 Myb_DNA-binding 5.4e-15 CL0123