Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0947 ATGATGCTCAGATCCAAGTTCCTTCTTCGAAGGCCTGCCGTGAATGTGTCAGGTTCTATATATATGTATAAAAGAAGAGCACGCATATATATAAAGAATGATGTTGAAATTTGGAGAGGTGAGCTATCAAATCGCAAAGACAATTCTTCGGTTGCTTACTATAATGGTCAAGTGAGTAAAAGACATATGCTATTTCCTTCGGTTTTCATTTCAAAAGTTTTTGTCCGGTTCTCAACGATCGATGGAGTGCCACTTAATGAGATGATTCCAGTGATCGATATTCATCATTGGATTAAATCCAACCATCCAACCATCACTGTTGTTCCATTCTATCCGTACATAGGGATTAAAGAGGGATTTGCTGTTGGGAATCGAGCGATGAAGAAGAGACAGGTGGTTGTGAAGAGAGATGTAGCCAAGACTTCGTCGTCGGTGATGAGGAACATCAGATATTTGGAGTGTCGGAAGAATCACGCCGCCAACGTAGGAGGCTACGCCGTCGATGGTTGCAGAGAGTTCATGGCCAGTGGTGATGACGTCACTGCCGGAGCTCTTACCTGTGCTGCTTGCGGCTGCCACAGGAATTTCCACAGAAGAGAAGTTCAGACCGAGGTTGTCTGTGAGTACTCTCCTCCTAATTCCGCTCGCTAA 651 0.4455 MMLRSKFLLRRPAVNVSGSIYMYKRRARIYIKNDVEIWRGELSNRKDNSSVAYYNGQVSKRHMLFPSVFISKVFVRFSTIDGVPLNEMIPVIDIHHWIKSNHPTITVVPFYPYIGIKEGFAVGNRAMKKRQVVVKRDVAKTSSSVMRNIRYLECRKNHAANVGGYAVDGCREFMASGDDVTAGALTCAACGCHRNFHRREVQTEVVCEYSPPNSAR 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0947 216 Pfam ZF-HD protein dimerisation region 149 201 IPR006456 -
Lele17g0947 216 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 133 204 - -
Lele17g0947 216 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 150 201 IPR006456 -
Lele17g0947 216 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 151 200 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0947 Lele-ChrLele17 20482528 20485134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0947 127 214 Zinc finger-homeobox gene family AT1G18835 75.281 2.17e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele17g0947 ZF-HD_dimer 2e-28 No_clan