Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0936 ATGGAAAACGTTGTGGTGGGACTCTGTAAGGAAGAAGAGAAATTGAATTTGCCTCCTGGATTTCGGTTTCATCCGACTGATGAAGAGCTTATAAGTCATTACCTGTACAAGAAGGTCACTGATTCAAGCTTCTCAGCCAGGGCCATTGGGGAGGTGGACTTGAACAGGTCTGAGCCTTGGGATTTGCCACGGAAAGCCAAAATGGGAGAAAAAGAGTGGTACTTCTTCTGCGTTAGAGACAGAAAATACCCAACTGGTTTGAGAACCAACAGGGCCACTGAAACAGGATACTGGAAAGCCACAGGGAAAGATAAAGATATTTACAGAGGAAAATCTCTGGTGGGAATGAAGAAAACTCTGGTTTTCTACAGAGGAAGAGCTCCCAAAGGAGAGAAAACCAACTGGGTCATGCACGAATACAGATTAGAGGGCAAATTCTCTGTCCACAACCTCCCTAAAACCGCAAAGAATGAGTGGGTGATTTGCAGGGTTTTTCCAAAAGGTTCAAGTGGTAAGAAAACCCATATTTCTGGGATGATGAGGCTGGATTCTCTTGGAAATGAATTGGGTTCTTCTGGTTTACCTCCACTGACAGATTCGTCACCTTTCCCTGGCAACAAAACCAAACCTGTCACAGAATCGGCTTACGTGCCCTGCTTCTCCAATCCAATTGATGTTCAGAGAACCAACAACCAAGGAGGGATCTTTGATTCCTACAGCAACTTCCCTAATTATGGGGTTTCTCCGAATCCCTCAGACACCCTTCCCAGAATCCCACTCTCTACTGGTTCGTTATATTCCACTCAACCACATCAAGCTCCTTCAAGTTTAGCTCTACCCAGTTCTATTTATGGCCTGCAAGACCAGACCCTGCTCAGAGCCTTGCTTGAAAACCAAGAATCAAGCAGGAACAATTTCAAGCCCGAGAGGGACATGATCAGCGTGTCGCAAGAAACAGGTCTTACTACAGACATGAACCCAGAAATCTCCTCGGTCATGTCGAATCTTGATATGAGACGAAGAACCTTTGACAATCAGCAGCAGCAACCGACTGCTTCATCTGCAGCAATGGACTATGAAGGTTTGTGGAACTACTCAGTTCAGATTTAA 1110 0.4532 MENVVVGLCKEEEKLNLPPGFRFHPTDEELISHYLYKKVTDSSFSARAIGEVDLNRSEPWDLPRKAKMGEKEWYFFCVRDRKYPTGLRTNRATETGYWKATGKDKDIYRGKSLVGMKKTLVFYRGRAPKGEKTNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFPKGSSGKKTHISGMMRLDSLGNELGSSGLPPLTDSSPFPGNKTKPVTESAYVPCFSNPIDVQRTNNQGGIFDSYSNFPNYGVSPNPSDTLPRIPLSTGSLYSTQPHQAPSSLALPSSIYGLQDQTLLRALLENQESSRNNFKPERDMISVSQETGLTTDMNPEISSVMSNLDMRRRTFDNQQQQPTASSAAMDYEGLWNYSVQI 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0936 369 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Lele17g0936 369 SUPERFAMILY NAC domain 14 167 IPR036093 GO:0003677|GO:0006355
Lele17g0936 369 FunFam NAC domain-containing protein 100-like 26 171 - -
Lele17g0936 369 Gene3D NAC domain 26 171 IPR036093 GO:0003677|GO:0006355
Lele17g0936 369 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 298 - -
Lele17g0936 369 ProSiteProfiles NAC domain profile. 17 167 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0936 Lele-ChrLele17 20409578 20410895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0936 15 365 NAC Transcription Factor Family AT5G07680 58.640 3.19e-132 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele17g0936 NAM 2.3e-40 No_clan