Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0932 ATGGAGACTGAGGAAATTAATTTGAACATTGAATCTGTTGTTGGTGCTGGAAATAATTGTAAGAGTGGTGATGGATTCATTGATAGAAGCAAAGTCAGGATTTTGTTATGTGACAACGATGCCAAGAGTTCGGAAGAGGTTTTTACGCTTCTCTTGAAGTGCTCTTATCAGGTTACTTCAGTGAGGTCAGCGAGACAGGTAATTGATGCATTGAACGCAGAAGGGCAAGATATTGATATCATACTTGCTGAAGTTGACCTCCCTATGAAGAAGGGTTGGAAGATGTTGAAGTACATTGCACGAGACAAGGAACTGCGCCGAATCCCTGTTATAATGATGTCGGCACAAGACGAGGTATCCATTGTTGTTAAGTGCCTAAAACTCGGAGCAGCTGACTATCTAGTAAAGCCTTTACGGACTAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGGCGCATGCTTGGACTTGTAGAGAAGAACATCTTAAGCTATGACTTTGATGTGGTTGTATCTGATCCTAGCGACGCCAATACAAACAGTACTACCTTGTTCTCAGATGATACAGATGACAGGTCCAAGCGAAGCACTAATCCTGAGACGGCAATGCCTATCCAACAGGAACTTGAGTCGACTGTTGCTGTTGCCTCTGCTGCTGTAGTAGTTGCTGAGGAGCCTCCAAATGTTCAAGCATCAGAATATCGCCCTGAAGTGCCTGGAATTAGTGATCGCCGAACTGGACATTTTTCGGTTGGTCCCAAGAAGAGTGAACTTAAGATTGGGGAGTCATCAGCCTTCTTCACTTATGTCAAAGCGGCCCCAATGAAGAGCAACTTCCAACCTGTCATTCATGTCGATCGTAATGCTTCTACAGAGTTGAGGTTGGAAGATACAAATCAAGCATGCCCTGAACAAGAGGTTAATGATCTTCAAATACATGAAAATGGAGAGACATGTAAAAGCCATTCACAGTATGACTTGCCGAGCAGTAACAGCATCCCGGATTCTTTCTCCATCGAAAGGTCTTCTACTCCTCCTGCATCAATGGAAACTTTACAGCAAAAACACTTCATGGAAGAACCTTTACCTCAGGGTATGATCCATCCAAGAAATGGAACTCATAATTCTGAACATGAAGCATCTGGCATGACTGGCCAACAACATCATTATCCATATTATATTTCAGGGGTTGTTAATCCCATTATGATGCCATCATCAGCGCAATTGTACCAGAAGAATCTCCAGGACCTGCAGGCCCATGCTGGTACAGCTATCATTGCACAATACAATCATCTTTCGCAATGTCCTCCTCATACGACGGGTATGACATCCTTTCCATATTACCACCCGATGGGTTTGTGCTTACAGCCTGGACAGATGTCTACTGTTCATTCATGGCCATCATTTGGTAATTCGAGTTCTTCTGAAGTCAAAATAAGTAAAGTCGATAGAAGAGAAGCGGCATTGATGAAGTTTAGGCAGAAAAGGAAAGAGCGCTGCTTTGATAAAAAAATTAGGTATGTCACCAGGAAACGACTTGCTGAAAGACGGCCACGAGTAAGAGGACAATTTGTTAGAAAGTTGAATGGCGTAAATGTAGATCTTAATGGCCAACCTGCTTCCACTGACTATGATGAGGATGATGAAGAAGATGAAGAAGATCAAGCAGCGCGAGATTCCTCTCCTGAGGATGCTTGA 1704 0.4308 METEEINLNIESVVGAGNNCKSGDGFIDRSKVRILLCDNDAKSSEEVFTLLLKCSYQVTSVRSARQVIDALNAEGQDIDIILAEVDLPMKKGWKMLKYIARDKELRRIPVIMMSAQDEVSIVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNILSYDFDVVVSDPSDANTNSTTLFSDDTDDRSKRSTNPETAMPIQQELESTVAVASAAVVVAEEPPNVQASEYRPEVPGISDRRTGHFSVGPKKSELKIGESSAFFTYVKAAPMKSNFQPVIHVDRNASTELRLEDTNQACPEQEVNDLQIHENGETCKSHSQYDLPSSNSIPDSFSIERSSTPPASMETLQQKHFMEEPLPQGMIHPRNGTHNSEHEASGMTGQQHHYPYYISGVVNPIMMPSSAQLYQKNLQDLQAHAGTAIIAQYNHLSQCPPHTTGMTSFPYYHPMGLCLQPGQMSTVHSWPSFGNSSSSEVKISKVDRREAALMKFRQKRKERCFDKKIRYVTRKRLAERRPRVRGQFVRKLNGVNVDLNGQPASTDYDEDDEEDEEDQAARDSSPEDA 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0932 567 PANTHER TWO-COMPONENT RESPONSE REGULATOR 32 233 IPR045279 GO:0009736
Lele17g0932 567 MobiDBLite consensus disorder prediction 543 567 - -
Lele17g0932 567 Gene3D - 32 237 - -
Lele17g0932 567 ProSiteProfiles Response regulatory domain profile. 33 151 IPR001789 GO:0000160
Lele17g0932 567 MobiDBLite consensus disorder prediction 323 347 - -
Lele17g0932 567 MobiDBLite consensus disorder prediction 532 567 - -
Lele17g0932 567 MobiDBLite consensus disorder prediction 240 254 - -
Lele17g0932 567 MobiDBLite consensus disorder prediction 233 255 - -
Lele17g0932 567 MobiDBLite consensus disorder prediction 180 206 - -
Lele17g0932 567 Pfam CCT motif 487 529 IPR010402 GO:0005515
Lele17g0932 567 SUPERFAMILY CheY-like 28 157 IPR011006 -
Lele17g0932 567 SMART REC_2 32 147 IPR001789 GO:0000160
Lele17g0932 567 ProSiteProfiles CCT domain profile. 487 529 IPR010402 GO:0005515
Lele17g0932 567 MobiDBLite consensus disorder prediction 321 347 - -
Lele17g0932 567 Pfam Response regulator receiver domain 34 145 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0932 Lele-ChrLele17 20377812 20381923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0932 20 566 Response Regulator Gene Family AT5G61380 51.981 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Lele17g0932 Response_reg 2.3e-17 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0932 17 20377812 20381923 Lele19g0628 19 3624541 3628590 hybridization
Lele17g0932 17 20377812 20381923 Lele20g0822 20 14927659 14931673 hybridization