Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0926 ATGGGTTGTGTCTATTCGAGGCAGACGGTGTCGGTGACGCCGGCGATCGATCACTTCGATCTGTTTCGGGGCAATGCAAGTTTGGGCCACTCGGGAAGGAGCTTGGGAGAGTTGGATGGTAAGAAGAAGAAGAAGAAGAGTGAGTCACAGGGCGTGTCTGAGAGAGAGAGTTCAAACTGGGGATGTGATGAATCTCTGAGCTTCCGATTGGGGAATCTGCAGAAGTATGTGGAAGGAGAACAAATAGCCGCCGGTTGGCCGGCGTGGCTCACCGCCGTCGCCAGCGAAGCCATTCACGGTTGGGTTCCCCTCCGAGCCGATGCTTTTGAGAAGCTCGAGAAGATTGGGCAGGGAACATACAGTAGTGTGTTTCGAGCGAAGGAACTTGAGACAGGGAAGATAGTGGCACTGAAGAAGGTGAGGTTTGACATATTTGAACCAGAAAGTGTGAGGTTTATGGCACGAGAGATAATGATTCTGAGAAGGCTTGATCATCCAAACATTGTAAAATTGGAGGGTTTGATTACTTCCAAGTTGTCATCTAGCATATACCTTGTGTTTGAGTACATGGAACATGACATCACAGGCCTCTTGTCCAGCCCTGATATCAAATTTAGTGAATCACAGATTAAATGCTACATGAAACAGCTGTTGTCTGGTCTTGATCATTGTCATTCACGTGGTGTGATGCATAGAGATATAAAAGGATCAAATCTTCTGGTGAACAATGAAGGGATACTAAAGGTTGCTGATTTTGGATTGGCAAAATTCTCTGTTTCTGGGAACAAGCAGCCGCTTACCAGCCGTGTTGTCACTTTGTGGTACCGTCCTCCTGAACTTTTGCTGGGTTCCACAGATTATGGTCACTCTGTGGATCTATGGAGTGTTGGCAGTGTATTTGCAGAACTTCTTGTTAGAAAGCCTATTCTTCAGGGGAGAACAGAGGTGGAACAATTGCACAAAATTTTCAAACTTTGTGGCTCCCCACCTGATGAATACTGGAAAAAGACCAAGCTTCCTCATGCAACTTTGTTTAAGCCTCAGCATACATACAATAGTTGCCTCCAAGATACCTTTAAAGATTTCCCCATAACTACTGTGAATCTTCTTCAAACTCTTCTTTCCATCGAATCATACAAGCGTGGAACTGCTTCATCTGCTCTTTCATCAGAGTATTTCAAGACAAAGCCTTATGCATGTGAACCGTCGAGCTTGCCGGTATACTCACCCAGTAAGGAGATTGATGCAAAACACTGGGAGGAGTCAAGAAGAAAAAAGATCGGTGGAAGATCTCGTGGACCCGAAACAAGAAAACCATCAAGAAAGCCGCCAGGATTCAGTAAACTAGCCCCAGCGGAGAGTTTGGCGAATCAATCTCGAAATTTGCAAGCATTCAATTGTAGAACTTCCAGCATCCTAAAAGAGAACACCAATATAAGTGAGGAGGTGCCAAAGCCATCAACAGATAGAGTCTCAGAAGATGCTTCCCATATTAAGAATCCATCTCATGGAGATATTCCCATATTACAAGTTTCAACTTCGAGTGGGTTTGCATGGGCAAAAAGGCGAAAAGATGATGCTTCAAGAAGATCTCATTGTCGATCTATTTCGAGGGGACATATTTTGAATTCTTCAGAACATTCTTCAAGAAACAACTTTGACAGCAGAAACCAGGAAAATAATAAGGAATTCTGCAACTCAAGGGGGGTGCATGACATACGTGAAATCTCTAAGCTTGCAATGTTGAATCAATGGGGCAAGTTTGATCGCCCAGATTCATTTGATGCTTCTGACGAATACCACTCACAAGAGCTATCTATAGCCCTTCATCACAGAGAATATTCAGCTTCCAGGAGAAGTAAAATGGATTCTGGAGAGAAGGTAGAATTTTCAGGACCACTGCTATCTCAAATGCATGCGGTCGATGAGCTCTTAGAAAGACATGAGCGTCACATCCGCCGTACAGTACGAAGATCTTGGTTTCAGAAAGGTATTAGGCACTAA 2004 0.4426 MGCVYSRQTVSVTPAIDHFDLFRGNASLGHSGRSLGELDGKKKKKKSESQGVSERESSNWGCDESLSFRLGNLQKYVEGEQIAAGWPAWLTAVASEAIHGWVPLRADAFEKLEKIGQGTYSSVFRAKELETGKIVALKKVRFDIFEPESVRFMAREIMILRRLDHPNIVKLEGLITSKLSSSIYLVFEYMEHDITGLLSSPDIKFSESQIKCYMKQLLSGLDHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLAKFSVSGNKQPLTSRVVTLWYRPPELLLGSTDYGHSVDLWSVGSVFAELLVRKPILQGRTEVEQLHKIFKLCGSPPDEYWKKTKLPHATLFKPQHTYNSCLQDTFKDFPITTVNLLQTLLSIESYKRGTASSALSSEYFKTKPYACEPSSLPVYSPSKEIDAKHWEESRRKKIGGRSRGPETRKPSRKPPGFSKLAPAESLANQSRNLQAFNCRTSSILKENTNISEEVPKPSTDRVSEDASHIKNPSHGDIPILQVSTSSGFAWAKRRKDDASRRSHCRSISRGHILNSSEHSSRNNFDSRNQENNKEFCNSRGVHDIREISKLAMLNQWGKFDRPDSFDASDEYHSQELSIALHHREYSASRRSKMDSGEKVEFSGPLLSQMHAVDELLERHERHIRRTVRRSWFQKGIRH 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0926 667 ProSiteProfiles Protein kinase domain profile. 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0926 667 SMART serkin_6 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0926 667 FunFam probable serine/threonine-protein kinase At1g54610 192 432 - -
Lele17g0926 667 MobiDBLite consensus disorder prediction 476 509 - -
Lele17g0926 667 PANTHER CELL DIVISION PROTEIN KINASE 107 397 - -
Lele17g0926 667 MobiDBLite consensus disorder prediction 415 454 - -
Lele17g0926 667 MobiDBLite consensus disorder prediction 33 60 - -
Lele17g0926 667 Gene3D Transferase(Phosphotransferase) domain 1 192 431 - -
Lele17g0926 667 MobiDBLite consensus disorder prediction 415 442 - -
Lele17g0926 667 MobiDBLite consensus disorder prediction 486 500 - -
Lele17g0926 667 FunFam probable serine/threonine-protein kinase At1g54610 96 191 - -
Lele17g0926 667 CDD STKc_CDK9_like 109 393 - -
Lele17g0926 667 MobiDBLite consensus disorder prediction 537 551 - -
Lele17g0926 667 MobiDBLite consensus disorder prediction 528 560 - -
Lele17g0926 667 SUPERFAMILY Protein kinase-like (PK-like) 102 398 IPR011009 -
Lele17g0926 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Lele17g0926 667 Pfam Protein kinase domain 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0926 667 Gene3D Phosphorylase Kinase; domain 1 96 191 - -
Lele17g0926 667 MobiDBLite consensus disorder prediction 35 52 - -
Lele17g0926 667 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0926 Lele-ChrLele17 20341262 20344926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0926 101 425 Core Cell Cycle Gene Families AT5G10270 48.974 2.00e-105 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lele17g0926 Pkinase 3.2e-66 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0926 17 20341262 20344926 Lele19g0636 19 3660730 3664692 hybridization
Lele17g0926 17 20341262 20344926 Lele20g0816 20 14896926 14900399 hybridization