Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0923 ATGTCAGAGCATGTAACAGATTTCTGGGGCTTAATATTAATCTGTTCCTTAATCCTTTTCTCAGCGGGTAAAATAGTTGCCGGAGATTCTCTGGATACAGACAGAGAAGTTTTGCTTCAGCTGAAATTATACCTCAACAATCAAACTCTAGTAGACCATGGACGATACACAAACTGGAACACGACAAGTTCGAATCCTTGTGAATGGTCGGGAATCTGGTGCGGCGGCGGCGGCAAAGGGACAACAACGACGAGGAGGGTGGTCGGAGTCGACCTCTCCGACAACAAGATCACCGGCGAGATATTCCAGAACTTCTCTCATCTCACTCATCTCACACACCTCGACCTTTCCCGGAACACACTCTCCGGCGAGATTCCGGCGGACTTAAGGCGGTGCCAAAAGCTCGTGTATCTCAATCTCTCCTACAATATTCTTCCCGAAGAGTTGAATTTAATCGCCTTGACAAACTTACAAACTCTTGACTTATCAGGCAACAGGCTTCATGGCGATCTTGGGTTGAATTTCCCTGCCATTTGTGGCAATCTGATTAGTCTGAATATCTCAGGGAATAACTTCACCGGTAGGATTGATGAATGCTTCGATCAGTGTTCGAAATTGCAGTACTTGGATTTGAGCACTAATAAACTGAGTGGGAATATATGGATGGGAATTGCGAAGCTGAGAAAGTTTTCTGTTTCGGAGAATTTTATCAGCGGAAAAATTCCTCCATCAGCTTTTCCGGCACAGTGCAATCTTCAAGTTCTAGACATTTCAGAAAACATGTTCACTGGGAATGTTCCTAAGGAGGTTGCTAACTGCAAGGATTTAACGATTCTGAATCTCTCTAGCAACAAGTTCAACGGATCAATACCTAAAGAAATTGGTTCAATTTCTGGGATTGAAGCATTGTACTTGGGGAACAACAGTTTCTCAAGAGATATCCCAGGAGAACTCTTGAACTTGACCAGTTTGGCGTTCTTGGATTTAACTAGAAATCAATTTGGTGGGGACATACAAGAGATATTTGGGAAATTCAAGCCGGTGAAGTATCTTCTATTGCACTCAAATTCTTACATTGGAGGATTATCTTCATCAGGAATTCTCAAATTACCAAACGTTCTACGCTTAGACCTAAGCTACAACAATTTCTCAGGCCCATTACCCACAGAAATCTCTCAAATGTCAAGCCTCAAATTATTAATGTTAGCCTACAATCGATTCAATGGACTTATTCCATCTGAATTTGGAAACTTGCCTCATCTTCAAGCTCTTGACTTATCATTCAACAATTTATCAGGGCCAATCCCTCCAAATCTTGGTAACTTAACCTCTCTTTTATGGCTCATGCTTGCGAATAATTCATTAACAGATGAAATCCCGATTGAGCTGGGGAACTGTTCGAGCTTATTATGGCTAAACCTTGCAAATAATAAACTCACGGGAAAATTCCCACCTGAATTGGCCAATATAGGAAGAAACGCCATGGTCACATTTGAATCAAATAGGCAACATGATACAGTTAGTGCTGGTTCTGGTGAGTGCTTGGCCATGAAGAGATGGATTCCTGCAGATTATCCTCCATTTAGTTTTGTTTATGACATTCTTACGAGGAAGAATTGCAGAAGAATTTGGGACAGATTGCTTAAAGGGTATGGGATTTTCGCGTTTTGCAGTACAGGTTCGTTTTCACCAATGTCTCAAATCTCTGGTTATGTTCAGCTAAGTGGGAATCAACTCTCAGGTGAAATTCCACCAGAAATTGGAACGATGCAGAACTTGAGCATGTTGCATTTAGGGCTTAATAAATTTTCTGGGAAACTACCTGTAGAGGTGAAAAATATGCCGCTTGTGGTGCTGAACATAACAAGAAACGAGTTTTCTGGGGAAATTCCTTCGGAAATTGGAACCATGAAGTGTTTACTGAACCTTGATCTCTCCTACAATAATTTTTCTGGGGTTTTTCCTTCAAGTTTGAGCAGCTTGACAGAGCTCAGCAAGTTCAACATTTCTTATAATCCCTTGATTTCAGGTGAGATTCCATCGTCAGGACAACTAGCGACGTTCGAGAAATACTCATATTTGGGGGATCCCCTGTTGGATCTGCCAAGTTTCATCGACAACTCCACCGATCATCACAAAAACACGACCTTTCGTAACAGAGCCATACAAAAATCCACGAATCTCTCTGTTTTCATGGCGTTCTTTGCTATCATTCTGGCTTTCTTAGTATTCGGTCTTCTTACTGTCATAATCTGTTTGCTGATAAAAACCCCGTCGGAAGAACCACTCCTGAGAGACATAAAACTCGACCATGAGTCTGGAACCTCGTCCCCATGGTTGTCGGACACAGTTAAGGTTATTCGATTGGACAGGACAGCTTTTACACACACTGACATCTTGAAAGCCACCGTGAACTTCTCAGACGACAGAATTATAGGCAAAGGAGGCTTCGGAACAGTGTACAGAGGAATATTTTCAGATGGGAGAGAAGTGGCAGTGAAAAAACTGCAAAGAGAAGGACTTGAAGGCGAAAAAGAATTCAGAGCAGAAATGGAAGTTCTAAGCGGCCATGGCTTGGGTTGGCCCCACCCAAACCTCGTCACACTCTATGGTTGGTGCCTCGACGGTTCAGAAAAAATACTGGTTTACGAATACATTTCCGGGGGAAGCTTGGAGGATCTCGTAACCGACAGATTAAAATTCAGTTGGAGACGACGGCTAGAAGTAGCCATTGACGTTGCTCGAGCTTTGGTTTACTTACACCATGAATGCTACCCTTCAATCGTTCACAGAGATGTGAAGGCAAGCAATGTGTTGTTGGACAGCAAAACAGGGAAGGCCAAAGTTACAGACTTTGGACTAGCTAGAGTGGTTGACGTCGGAGACAGCCACGTCAGCACGATGGTGGCAGGGACGGTGGGGTACGTGGCGCCGGAGTACGGCCACACATGGAAGGCGACGACGAAAGGGGACGTGTACAGTTATGGTGTGTTGGCTATGGAATTGGCGACTGGAAGAAGAGCATTGGACGGAGGGGAAGAGTGTTTGGTGGAATGGGGAAGGAGGGTGATGTGTCACGGAAGAAATAGGCCAATCGGCCGGCCGGTGATTCCGGTGGTGCTGATGGGTTCTGGTTTGCTTGAAGGTATGGAGGAGATGGTGGAGCTGTTAAGGATAGGGGTGAGGTGCACGGCGGAGACACCGCAGGCTCGGCCGACGATGAAGGAGGTTCTGGATATGCTGATCAAGGTGTATTACCCCAAAGTGGATTCAAGCTATGAAAATCTGAGTCATTAA 3297 0.4431 MSEHVTDFWGLILICSLILFSAGKIVAGDSLDTDREVLLQLKLYLNNQTLVDHGRYTNWNTTSSNPCEWSGIWCGGGGKGTTTTRRVVGVDLSDNKITGEIFQNFSHLTHLTHLDLSRNTLSGEIPADLRRCQKLVYLNLSYNILPEELNLIALTNLQTLDLSGNRLHGDLGLNFPAICGNLISLNISGNNFTGRIDECFDQCSKLQYLDLSTNKLSGNIWMGIAKLRKFSVSENFISGKIPPSAFPAQCNLQVLDISENMFTGNVPKEVANCKDLTILNLSSNKFNGSIPKEIGSISGIEALYLGNNSFSRDIPGELLNLTSLAFLDLTRNQFGGDIQEIFGKFKPVKYLLLHSNSYIGGLSSSGILKLPNVLRLDLSYNNFSGPLPTEISQMSSLKLLMLAYNRFNGLIPSEFGNLPHLQALDLSFNNLSGPIPPNLGNLTSLLWLMLANNSLTDEIPIELGNCSSLLWLNLANNKLTGKFPPELANIGRNAMVTFESNRQHDTVSAGSGECLAMKRWIPADYPPFSFVYDILTRKNCRRIWDRLLKGYGIFAFCSTGSFSPMSQISGYVQLSGNQLSGEIPPEIGTMQNLSMLHLGLNKFSGKLPVEVKNMPLVVLNITRNEFSGEIPSEIGTMKCLLNLDLSYNNFSGVFPSSLSSLTELSKFNISYNPLISGEIPSSGQLATFEKYSYLGDPLLDLPSFIDNSTDHHKNTTFRNRAIQKSTNLSVFMAFFAIILAFLVFGLLTVIICLLIKTPSEEPLLRDIKLDHESGTSSPWLSDTVKVIRLDRTAFTHTDILKATVNFSDDRIIGKGGFGTVYRGIFSDGREVAVKKLQREGLEGEKEFRAEMEVLSGHGLGWPHPNLVTLYGWCLDGSEKILVYEYISGGSLEDLVTDRLKFSWRRRLEVAIDVARALVYLHHECYPSIVHRDVKASNVLLDSKTGKAKVTDFGLARVVDVGDSHVSTMVAGTVGYVAPEYGHTWKATTKGDVYSYGVLAMELATGRRALDGGEECLVEWGRRVMCHGRNRPIGRPVIPVVLMGSGLLEGMEEMVELLRIGVRCTAETPQARPTMKEVLDMLIKVYYPKVDSSYENLSH 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0923 1098 SUPERFAMILY L domain-like 226 485 - -
Lele17g0923 1098 Pfam Leucine rich repeat N-terminal domain 32 74 IPR013210 -
Lele17g0923 1098 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 300 1081 - -
Lele17g0923 1098 SMART LRR_typ_2 154 174 IPR003591 -
Lele17g0923 1098 SMART LRR_typ_2 418 441 IPR003591 -
Lele17g0923 1098 SMART LRR_typ_2 442 466 IPR003591 -
Lele17g0923 1098 SMART LRR_typ_2 394 417 IPR003591 -
Lele17g0923 1098 SMART LRR_typ_2 108 132 IPR003591 -
Lele17g0923 1098 SMART LRR_typ_2 321 344 IPR003591 -
Lele17g0923 1098 SMART LRR_typ_2 637 660 IPR003591 -
Lele17g0923 1098 FunFam Leucine-rich repeat receptor protein kinase MSP1 769 885 - -
Lele17g0923 1098 Gene3D Ribonuclease Inhibitor 30 174 IPR032675 -
Lele17g0923 1098 SUPERFAMILY Protein kinase-like (PK-like) 790 1082 IPR011009 -
Lele17g0923 1098 Gene3D Ribonuclease Inhibitor 175 246 IPR032675 -
Lele17g0923 1098 Gene3D Ribonuclease Inhibitor 358 520 IPR032675 -
Lele17g0923 1098 CDD STKc_IRAK 812 1083 - -
Lele17g0923 1098 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 886 1089 - -
Lele17g0923 1098 SMART serkin_6 806 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0923 1098 FunFam Putative LRR receptor-like serine/threonine-protein kinase 345 506 - -
Lele17g0923 1098 FunFam Putative LRR receptor-like serine/threonine-protein kinase 565 712 - -
Lele17g0923 1098 ProSitePatterns Protein kinases ATP-binding region signature. 812 835 IPR017441 GO:0005524
Lele17g0923 1098 SUPERFAMILY RNI-like 85 291 - -
Lele17g0923 1098 Gene3D Ribonuclease Inhibitor 558 716 IPR032675 -
Lele17g0923 1098 PRINTS Leucine-rich repeat signature 154 167 - -
Lele17g0923 1098 PRINTS Leucine-rich repeat signature 111 124 - -
Lele17g0923 1098 ProSiteProfiles Protein kinase domain profile. 806 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0923 1098 ProSitePatterns Serine/Threonine protein kinases active-site signature. 928 940 IPR008271 GO:0004672|GO:0006468
Lele17g0923 1098 SUPERFAMILY L domain-like 573 681 - -
Lele17g0923 1098 Gene3D Ribonuclease Inhibitor 247 351 IPR032675 -
Lele17g0923 1098 Pfam Leucine rich repeat 226 286 IPR001611 GO:0005515
Lele17g0923 1098 Pfam Leucine rich repeat 90 143 IPR001611 GO:0005515
Lele17g0923 1098 Pfam Leucine rich repeat 392 431 IPR001611 GO:0005515
Lele17g0923 1098 Pfam Leucine rich repeat 155 216 IPR001611 GO:0005515
Lele17g0923 1098 Gene3D Phosphorylase Kinase; domain 1 774 885 - -
Lele17g0923 1098 Pfam Protein kinase domain 807 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0923 1098 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 242 338 - -
Lele17g0923 1098 Gene3D Transferase(Phosphotransferase) domain 1 886 1094 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0923 Lele-ChrLele17 20317648 20321158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0923 48 1084 Receptor kinase-like Gene Family AT4G39400 33.014 9.06e-151 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Lele17g0923 Pkinase 1.1e-44 CL0016