Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0911 ATGCACTCTCCGTCTCATACTCCCATCTTCTCTCAGCAACCCTATCCTTCAGAATCATTCTTCTTAACTTTTCCTCAACCAACGATTCCCTCCGTGCCATCGGATTCCTCTCTTCATCCTCCTGGATCCGACCCGCTAGGAAGTTCGGCCTTATACGCGTTGTTCCGCTCTGCTTATGGGCACCAATCAATTAATACTCTGGACACAAAGGCGGATAGTCTGAACTGGATCGTCAAACAAGTTCGATCCATAAGATATGAAGCTACTGCCAAAGCTTCTCTTGGGACTTCAGCTGTGCCCGCAAGTTTTCCTTCTGCGTGGAATGACACCTTGATGCGTCAACTTTTGCCTGGTCTTACCCCAGTAATGTTGCCCCTGCCAAAGCAAACCAAAGCTAATGAACTAATGCGATGTGAGGTTTGCAAAATTGATTGCACTAGCAAAGACGTTTTTGAAAAGCACTTATCAAAAGAGAAGCACATGAAGAATATGCGGTTGCTAAATAACCCCACCAATACAATAATACCAGGAGCCTCTCATGCAAGTTTACCAAGTCAAATAAGTAGGGTCCGAGGACAAGATTTATTTGGTGTAGTGAGCAAAGAGTTAGAGTCTAAGAAACAGAAGCTTGTGAGTGGCGGTGCAGCAGTTGATTCAGTAAGGGTTTGCACGATATGTAATGTCGCCTGCAATAGTCAAGGTGTATATAACAAACATCTATCTGGGAAAAAGCATGCTGCTCAGATTAGGTTGATGTCTGATAATGGGATTGGTCCTTATCTTGCCGTGTTTAACCGTCATGGCAGTGGTCCTTGGAAAGAAGTCCCAAAGAAAATTAAGTTTACCCAACCTTCATGGTGTGAAATTTGCAAGATCAGTTGTAACAGCAGGGATGCATATATGACACACTTAGCTGGGAAGAAACACCTGAGGAACCTGGAGTTGCTGTCAAAATCAAATAATCCTGTTATTGGTCCCCAGGAAAAGCCAAACATTTGTAAAGATGAAGGGATAAGTTCACATAAACCAAATAAACCAACCATGGTAGAGGATATTGAGGCAAAGAAACGTAAACTTGTGAAAGGTGGGGCAGCAGAAACTGATATTAGAATATGCACTCTATGTAACGTGGTGTGCAACAGTCAAACGGTGTTTTATTTTCACCTTACTGGGCAGAAACATGCCGCGACAATGATGGATTTGAATGGTAAAAGTTCAACAACACAGTTTAGTGCAGTTGGATTTTCACGGGATGAAAATATGGATCATTATAATTGGAGTGACATCGATGCTTCTTTTAATGTGGAGGAACTATTGAAAGTTAAAACAAGATTTAGAGAGTTGCAGCAAGGGAAGTCTGAACTTTGCATTGGCTCTTTCATGAAAATGCTGCTACTTCTATTAAAGAACTATTACCTTAAGGATCAGCTTAATGGAAGGAACATAGAGGTGAAATACCTGCAAGAGCTTGTTTACAGCCTCAAATTGAAAATAAAGGATATGGAAGGCTTACAAGATGAGGTTTTCGGGTTAAAGGAGGAGCTGCAGAGATCCAATTCTGAGCAATTTTTCTTGTTGAAGGAATTAGATAAAGAAATGGAATTGGAGAAGTCAACACTGTACGTAGAGAAATTGGAGGAATCAATTTCATCCATGGCATTAGAGTCTGAATGTGAAGTAGAGAAACTTAAGGATAAGATTGTTGTTGTCAACATGAACTCTAAAAATTTTTCTCAGAAGGTTGAAGAGTGGCTAGAAAACAAGGACAGATCACAACCCAATGGTCAGTCTTCCTTGAGCGAACAAGAGAAGGAGTCAGACATATCAAAGAATATAAGGCTATCATTGGCGTTGGAAACAGATGCAGGTATTAAAGAGGAGATGGAGAAGATGTCATCTCAGATGCAAAAGTATAAAATACTTGTGGAGAAACTTAAGGAAGAATTAAGAGAAGAAAAGTTGAAGGCCAAAGAAGAAGCAGAGGACCTTGCTCAATAA 1998 0.4074 MHSPSHTPIFSQQPYPSESFFLTFPQPTIPSVPSDSSLHPPGSDPLGSSALYALFRSAYGHQSINTLDTKADSLNWIVKQVRSIRYEATAKASLGTSAVPASFPSAWNDTLMRQLLPGLTPVMLPLPKQTKANELMRCEVCKIDCTSKDVFEKHLSKEKHMKNMRLLNNPTNTIIPGASHASLPSQISRVRGQDLFGVVSKELESKKQKLVSGGAAVDSVRVCTICNVACNSQGVYNKHLSGKKHAAQIRLMSDNGIGPYLAVFNRHGSGPWKEVPKKIKFTQPSWCEICKISCNSRDAYMTHLAGKKHLRNLELLSKSNNPVIGPQEKPNICKDEGISSHKPNKPTMVEDIEAKKRKLVKGGAAETDIRICTLCNVVCNSQTVFYFHLTGQKHAATMMDLNGKSSTTQFSAVGFSRDENMDHYNWSDIDASFNVEELLKVKTRFRELQQGKSELCIGSFMKMLLLLLKNYYLKDQLNGRNIEVKYLQELVYSLKLKIKDMEGLQDEVFGLKEELQRSNSEQFFLLKELDKEMELEKSTLYVEKLEESISSMALESECEVEKLKDKIVVVNMNSKNFSQKVEEWLENKDRSQPNGQSSLSEQEKESDISKNIRLSLALETDAGIKEEMEKMSSQMQKYKILVEKLKEELREEKLKAKEEAEDLAQ 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0911 665 SUPERFAMILY beta-beta-alpha zinc fingers 216 252 IPR036236 -
Lele17g0911 665 Coils Coil 501 521 - -
Lele17g0911 665 SMART c2h2final6 136 160 IPR013087 -
Lele17g0911 665 SMART c2h2final6 370 394 IPR013087 -
Lele17g0911 665 SMART c2h2final6 221 245 IPR013087 -
Lele17g0911 665 SMART c2h2final6 285 309 IPR013087 -
Lele17g0911 665 Pfam Zinc-finger of C2H2 type 372 394 - -
Lele17g0911 665 Pfam Zinc-finger of C2H2 type 223 245 - -
Lele17g0911 665 Pfam Zinc-finger of C2H2 type 286 309 - -
Lele17g0911 665 Pfam Zinc-finger of C2H2 type 138 155 - -
Lele17g0911 665 SMART ZnF_U1_5 218 252 IPR003604 GO:0003676|GO:0008270
Lele17g0911 665 SMART ZnF_U1_5 367 401 IPR003604 GO:0003676|GO:0008270
Lele17g0911 665 SMART ZnF_U1_5 282 316 IPR003604 GO:0003676|GO:0008270
Lele17g0911 665 SMART ZnF_U1_5 133 167 IPR003604 GO:0003676|GO:0008270
Lele17g0911 665 Coils Coil 628 665 - -
Lele17g0911 665 SUPERFAMILY beta-beta-alpha zinc fingers 130 167 IPR036236 -
Lele17g0911 665 SUPERFAMILY beta-beta-alpha zinc fingers 271 316 IPR036236 -
Lele17g0911 665 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 562 665 - -
Lele17g0911 665 SUPERFAMILY beta-beta-alpha zinc fingers 367 397 IPR036236 -
Lele17g0911 665 MobiDBLite consensus disorder prediction 585 607 - -
Lele17g0911 665 Gene3D Classic Zinc Finger 273 315 - -
Lele17g0911 665 Gene3D Classic Zinc Finger 198 252 - -
Lele17g0911 665 Gene3D Classic Zinc Finger 126 167 - -
Lele17g0911 665 Gene3D Classic Zinc Finger 353 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0911 Lele-ChrLele17 20246330 20252348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0911 138 398 C2H2 Transcription Factor Family AT5G61190 25.685 2.09e-13 72.0