Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0906 ATGGATGCCAAGGACATCCTTGGTTTGCCCAAAACTTCCTTGCCAATTCAAGAGAAAAAGTCTCGGCCGCAAAAAGATTCACAGAGAAAACCAGATGGCATTTCACGGGAGGTATATGCACTCACTGGTGGTTTGGCACCTCTTATGCCTGCAATTGATTCATCTCAAATAAAGAAAAGGCCTCCATCTGACGAGAAGATCACTTGGCAGTGGCTTCCTTTCACCAATTCTGCTCGCAAAGATAATCTTCAACTGTACCATTGGGTCCGAGTTGTAAATGGTGTTCCACCAACTGGGGACTATTCTTTTGCCAAATATAACAAGTCTCTGGACATTATCAAATACACAGATGAGGAGTATGTGAAGTATCTGACAGATCCAATGTGGACCAAGGAAGAGACGGATCAACTGTTTGACTTGTGTGAGAGGTTTGATCTTCGGTTCGTTGTGATAGCTGACAGGTTCCCATCATCACGAACTGTAGAGGAATTGAAAGACCGATACTACAGTGTATCTCGGACTCTGTTAATTGCCAGGGCTCCATCTTCTGCGGAAGTTCCAATGCATCCTTTAGTTAAGGAACCATACAATGTTTCACAAGAGGTAGAGCGGAAACGAGCACTGTCCATGTACCTCTCTCAAACAAAGCAACAAGAGCGAAAAGATCAAGAGGTTCTTGCTGAAGCAAAAAGAATAACTGAATCACGCATGCCTGCAAAGGTTGCTGAAGAGTCTGAGGTTCCTGCTGCATCAAATGCTGGTGCGGAAGCTACAGAGAAGGCTATCTCTGGTGATCCTCTATCAAGTGTTCAGCTTCCATCAACAGTTGTTCCGTCCACATCAACAGCAGATAATGCATCCACTCTTGCTTCCCTTCGCATGCTTCGTGTGTATCTAAGAACATATGCACTTGATCAAATGGTCCAAGCTGCAAGCTCATCTGCTGGACTCCGGACCATCAAACGGGTGGAACAAACACTGCAAGAAGTTGGGGTTAATTTAAAACCAAGGGTTCCAACCAAAGCTGTTTGTGCAGAACATCTTGAATTAAGAAAAGAAATACTAACTCTGCTCAATCTTCAGAAACAGCTGCAGTATAAGGAGGCAGCAGGTCGTGATGGTTCATACACTGAAACACCTGGCACACCGAAGGATAGAACATTTATTCCAGATTCTATGAGTTTTGGAGGTGAGAGGGTTGGTAAAAGGGACCAGAAACGCAAGGCGCCTGGGAGGATATCAGAAGCTCCATCATCACCGGCTCAGTCTAAAAGGCCTAGAAAACTAAAGGCCTCTGATCTATAAATTCTGTCAACGAGAATGAGGAATGCAGGTGTAAACTCATGA 1347 0.4454 MDAKDILGLPKTSLPIQEKKSRPQKDSQRKPDGISREVYALTGGLAPLMPAIDSSQIKKRPPSDEKITWQWLPFTNSARKDNLQLYHWVRVVNGVPPTGDYSFAKYNKSLDIIKYTDEEYVKYLTDPMWTKEETDQLFDLCERFDLRFVVIADRFPSSRTVEELKDRYYSVSRTLLIARAPSSAEVPMHPLVKEPYNVSQEVERKRALSMYLSQTKQQERKDQEVLAEAKRITESRMPAKVAEESEVPAASNAGAEATEKAISGDPLSSVQLPSTVVPSTSTADNASTLASLRMLRVYLRTYALDQMVQAASSSAGLRTIKRVEQTLQEVGVNLKPRVPTKAVCAEHLELRKEILTLLNLQKQLQYKEAAGRDGSYTETPGTPKDRTFIPDSMSFGGERVGKRDQKRKAPGRISEAPSSPAQSKRPRKLKASDLXILSTRMRNAGVNS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0906 448 MobiDBLite consensus disorder prediction 18 33 - -
Lele17g0906 448 CDD SANT_DMAP1_like 129 171 - -
Lele17g0906 448 MobiDBLite consensus disorder prediction 371 448 - -
Lele17g0906 448 Gene3D - 98 184 - -
Lele17g0906 448 Pfam SANT/Myb-like domain of DAMP1 101 175 IPR032563 -
Lele17g0906 448 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 1 417 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Lele17g0906 448 SUPERFAMILY Homeodomain-like 125 176 IPR009057 -
Lele17g0906 448 MobiDBLite consensus disorder prediction 1 36 - -
Lele17g0906 448 FunFam DNA methyltransferase 1-associated protein 1 97 184 - -
Lele17g0906 448 SMART sant 125 174 IPR001005 -
Lele17g0906 448 MobiDBLite consensus disorder prediction 397 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0906 Lele-ChrLele17 20213942 20218704 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele17g0906 SANT_DAMP1_like 2.4e-30 CL0123