Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0886 ATGAATGAAGATTCAAGAGAAGGCTATTACAAAGCGAAGCAAGAGAGAGCTACAATGAACAACGACGACGATATTGACAAATTCTCAAAGTTACCTTCTTCAAGACAGTGGCCTGGTTTCAGAAATCCAAGAATCGTGCGAGTTTCTAGATCTTTCGGAGGAAAAGATAGGCATAGCAAAGTTTGCACCATAAGAGGATTAAGAGACAGAAGGATTAGGCTATCAGTGCCCACAGCAGTTCAGCTTTATGATCTTCAAGATAGGCTTGGACTTAGTCAACCCAGTAAGGTCATAGATTGGTTGCTTGAAGCCACAAAGTATGATATTGATAAGCTTCCACCTCTTCAAATTCCTCATGGCTTCCCTCAATTTCATCATCCTCAAACCCTACTTCCTCATCATCTTCATGAGCCTGCAATTTCATTGCATTCTTCTCTTGATATAGGATCTGTGTTTGAAAAGGGAAAGTGGGTCAAAGCAAGTGAAGAAGAAGAAGAAGGAAATGGAGATAATAATAATAATAATGGGTTTGGTGAGATTCCATTATTTCATCAGAAGCATTTTCCCCCACAGTACTACACTGGCATGCCATGTAATTATAATAACCCTTATCATATTTTGGAACCTGCGAGTTTATCTTTATCCCAATTTGGAAGCCATGGATTAGTGTTTCCTTCACAGACAGAATTTGCAAATTCTCAAAGCAGTAGTGGAAATTGCGTGCAGTTTTCTTCTGGTTTGCCTGCTGCTGTAGTACCATCTCCTTCTGGTTCCAGTAAATTACTGTTTTGCCCATCTTCTTCTTCGTCTGATGCTGCTGCTGTCACAGTACCTTCGTTGTTTTCTCCACATCAGATTGCCACCTCAGCAGAAGACAATGATCCGAGAGTTCAAGTCAACAACCATTTTCATCAATTGTTGAGTTTTTCAAGTTCTCATTACCCTCACATTTCATGTCTGAAACCCCTCCCAGTACCATTTATTAGTTCTAAGCTTCTTGGTTCGGATCATAATCAACCAAACAAGGGAAGTAATAATCTTTGA 1044 0.3985 MNEDSREGYYKAKQERATMNNDDDIDKFSKLPSSRQWPGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAVQLYDLQDRLGLSQPSKVIDWLLEATKYDIDKLPPLQIPHGFPQFHHPQTLLPHHLHEPAISLHSSLDIGSVFEKGKWVKASEEEEEGNGDNNNNNGFGEIPLFHQKHFPPQYYTGMPCNYNNPYHILEPASLSLSQFGSHGLVFPSQTEFANSQSSSGNCVQFSSGLPAAVVPSPSGSSKLLFCPSSSSSDAAAVTVPSLFSPHQIATSAEDNDPRVQVNNHFHQLLSFSSSHYPHISCLKPLPVPFISSKLLGSDHNQPNKGSNNL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0886 347 MobiDBLite consensus disorder prediction 1 30 - -
Lele17g0886 347 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 272 IPR005333 GO:0003700
Lele17g0886 347 ProSiteProfiles TCP domain profile. 54 112 IPR017887 -
Lele17g0886 347 Pfam TCP family transcription factor 54 161 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0886 Lele-ChrLele17 20092079 20093122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0886 39 223 TCP Transcription Factor Family AT5G60970 46.818 7.50e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele17g0886 TCP 4.1e-25 No_clan