Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0880 ATGGGATTTGATCACGCTAAGGACCTGAAGCTTGTCGCCTTCATTGCTCTGTGTTTCGTTCTAATCTCTCAGGCGGTGGCATATGATCCTTTGGATCCAACTGGGAACGTGACGATAAGATGGGATATCATGTCCTGGACTTCAGATGGATATTTGGCGACAGTGACGATATTCAACTTTCAGTTGTACCGAAATATCATGAACCCAGGGTGGACATTAGGGTGGACATGGGCGAAAAAGGAGATAATATGGACAATGGTGGGAGCACAGGCGACTGAACAAGGAGATTGTTCTAAGTTCAAGTTAAAGATTCCACATAGCTGCAAGAGGAATCCTCAAGTGGTGGATTTGCTTCCAGGAGCTCCTTACAATATGCAGTATCAAAACTGCTGCAAAGGGGGTGTCCTAACATCTTACGGACAAGAACCTACGGCTGCATTCTCAGCTTTTCAGATTGCTGTCGGCCAATCTGGCACTTCCAACAAGACTGTCAAACTCCCCAAGATCTTCAAGTTCCTAGGACCAGGCCCAGGTTACTCATGTGGCCCAGCTAAGTGTCCTGGAATGTCACATGTACTTATTCCCAGTTTCTTGCCTCCAAGAACCCTAGTTGCTGTGTTTCTTTCTCATCTTTCTACAGTGATAAAATCACCCCTTGTCCAACCTGTGCTTGTGGTTGTCAGAACAATGATACCAAGCGGCTCAAAGATACCGGAAGAAGATGAAAAAAGCAGCCCCAAGAAGGTCGATAACGTCAATAACCCACCATTGTTGCAATGCACACGCCACATGTGCCGTGTTAGGGTTCATTGGCATGTGAAATTCAACTATCATGATTATTGGAGAGCCAAGATCGCGATCATCAACTTTGACTATCGAAATAACTATACTCAGTGGACTCTTGTTGCACAGCATCCTAACCTCAACAATATCACCCAAGTCTTTAGCTTTGAATACAAGCCAGTTCTTCCTTATGAATCCATTAATGACACGGGCATGTTCTATGGTTTGAAATACTACAATGACATGTTGATGCAAGCTGGGCCTCTAGGGAATGTTCAGTCTGAGGTGCTTATGAAGAAGGACAAGAGCACTTTCACGCTCAAGCAGGGATGGGCATTTCCCAGGAAGGTCTACTTCAATGGCGACGAGTGCATGCTACCACCTCCGGACTCGTACCCTACATTGCCAAATTCTGCTAATAAACTACCAACAAGCGTTTCATTCATGGCAACCTATGCGAACTATCCATCGTCACTTTCTACTGTTTCAGTTGCAGTTTCAATGCATTCTAGAGCACCTGAGAATCGTAGAATATAA 1320 0.4492 MGFDHAKDLKLVAFIALCFVLISQAVAYDPLDPTGNVTIRWDIMSWTSDGYLATVTIFNFQLYRNIMNPGWTLGWTWAKKEIIWTMVGAQATEQGDCSKFKLKIPHSCKRNPQVVDLLPGAPYNMQYQNCCKGGVLTSYGQEPTAAFSAFQIAVGQSGTSNKTVKLPKIFKFLGPGPGYSCGPAKCPGMSHVLIPSFLPPRTLVAVFLSHLSTVIKSPLVQPVLVVVRTMIPSGSKIPEEDEKSSPKKVDNVNNPPLLQCTRHMCRVRVHWHVKFNYHDYWRAKIAIINFDYRNNYTQWTLVAQHPNLNNITQVFSFEYKPVLPYESINDTGMFYGLKYYNDMLMQAGPLGNVQSEVLMKKDKSTFTLKQGWAFPRKVYFNGDECMLPPPDSYPTLPNSANKLPTSVSFMATYANYPSSLSTVSVAVSMHSRAPENRRI 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0880 439 PIRSF COBRA 228 426 IPR006918 GO:0010215|GO:0016020
Lele17g0880 439 PIRSF COBRA 4 196 IPR006918 GO:0010215|GO:0016020
Lele17g0880 439 Pfam COBRA-like protein 51 186 IPR006918 GO:0010215|GO:0016020
Lele17g0880 439 PANTHER PROTEIN COBRA 15 187 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0880 Lele-ChrLele17 20048764 20050872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0880 19 411 COBRA Gene Family AT3G02210 52.998 1.66e-163 466