Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0868 ATGGAGCTGCCTCAAGCGCGTCCCTTTGGAACCGAAGCAAGGAAACCGACGCATGACTTTCTGTCCCTGTACAGTCATTCAACAGCCCAACAAGATCCAAGGCCACCATCACAAGGAAGTTACCTGAAAACGCATGATTTCTTGCAGCCACTAGAACGTGTTGAGAGGAAAGCAAACGCGAAGGAAGAAGCATCGGATGAGATATCATCAGTGGTTCAAAAGCCACCTCCTCCAGCGCCGCCGCCGCCGCCGACACCATGTGTTGAGCACATTCTACCTGGAGGCGTTGGGACTTACAGTATCAGCCACATTTCGTATTTTAGTAATCCCAGGGTTCCAAAGCCGGAGGCTTCTTCCCTCTTCACTGTGTCTCCTTGTGAAGCAAGTTCAGACAGAAATGAGGAGAACTCCAACTGTAGTTCTTATACTGGAAGTGGTTTCACTTTGTGGGAAGAGTCTGCCGTTAATAAGGGAAAGACAGGGAAGGAGAATGACGTGGGAGAGAAACCCGTTATAGCAGAGCGTGCAGCCAAGCCAGGGCAGTGGTCGTTGACTGAGAGAGCATCTCAGTCATTTGTTAAGAATAATCAGAATAGCTTCAGTTCTATCACTTCCACTCAGAAAAGTGGGCAGAAGAACCAGAGTTTTATTGATATGATAAAATCCGCCAAGGATTGCTCTCAGGATGAGGAACTAGACAATGAAGAAGCATTCATTTTTAAAAAGGGATCCTCAACTACCCAAAGAGGCGAATTGAGAGTGAAAGTGGATGGGAAGAGTTCTGATCAAAGGCCAAACACACCACGATCAAAACACTCTGCAACTGAACAGCGTAGAAGGAGCAAAATTAATGACAGATTCCAGATGTTGAGAGAGCTTATACCACATAGTGACCAGAAAAGAGACAAGGCGTCTTTTCTGTTGGAGGTCATTGAGTACATTCAATTTTTACAAGAAAAGGTTCATAAACACGAAGGTTCATACCAAGCGTGGAATCAAGAGAAAGAAAAATTGACTCCATGGAGGAATAATCACAGGCCTTCAGAAAGCAATGATGATCAATCTCGTGTAATAAATAGTGGGTCAGGTCCTTCTTCAATATTACTGTTTCCTTCAAAGATGGAGGAGGAAAATTTTAGCATCTCCCCAACAATTACTGGGGGCACAAAGATCGTAGATGCCGGCACCAGTTCTGCAACTACATTGAAGGCAATGAATCAACATCCTGGAATAACCAATAATAAGGCCATGCCAATTCCTAACCCTTCACAGCCAAAGTTTTTCAATCCGTGCCAAAGTGGCGGTCCAGGTGGATTGGTGCCTCAGCTCACACACAGGCTAACCTCAGATGCTGAAAACACCATATATAATCCCTTAGGACTATCTCAGACCCACACTTCTGCTACAGGGGTGACTGCTGCTAGTGATAAGCTTAAAGAGAAAGAGCTCACTGTTGAAAGCGGTGCCATTAGCATATCAAGTGTGTACTCAAAAGGGTTGTTGGATTCACTAACACAAGCACTGAAGAATTCAGGAGTGGATTTGTCACAGGCTAGCATCTCAGTTCAAATTGAGCTTGGTAAGCAAGCAAACATCAGACCAGTTGGACCAACTTCTGGGGTTAAGGATGAAGTTACTTCTAGCAATCACGGGATGATGAAGCGCTCTAGAGTTTGTAGCCTAGAGGAGACTGACCTAGCAGTAAAGAAGCTAAAGACAAGCAGAAGTTGA 1731 0.45 MELPQARPFGTEARKPTHDFLSLYSHSTAQQDPRPPSQGSYLKTHDFLQPLERVERKANAKEEASDEISSVVQKPPPPAPPPPPTPCVEHILPGGVGTYSISHISYFSNPRVPKPEASSLFTVSPCEASSDRNEENSNCSSYTGSGFTLWEESAVNKGKTGKENDVGEKPVIAERAAKPGQWSLTERASQSFVKNNQNSFSSITSTQKSGQKNQSFIDMIKSAKDCSQDEELDNEEAFIFKKGSSTTQRGELRVKVDGKSSDQRPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIQFLQEKVHKHEGSYQAWNQEKEKLTPWRNNHRPSESNDDQSRVINSGSGPSSILLFPSKMEEENFSISPTITGGTKIVDAGTSSATTLKAMNQHPGITNNKAMPIPNPSQPKFFNPCQSGGPGGLVPQLTHRLTSDAENTIYNPLGLSQTHTSATGVTAASDKLKEKELTVESGAISISSVYSKGLLDSLTQALKNSGVDLSQASISVQIELGKQANIRPVGPTSGVKDEVTSSNHGMMKRSRVCSLEETDLAVKKLKTSRS 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0868 576 MobiDBLite consensus disorder prediction 338 352 - -
Lele17g0868 576 MobiDBLite consensus disorder prediction 156 172 - -
Lele17g0868 576 SMART finulus 273 323 IPR011598 GO:0046983
Lele17g0868 576 MobiDBLite consensus disorder prediction 1 87 - -
Lele17g0868 576 FunFam BHLH domain class transcription factor 265 337 - -
Lele17g0868 576 Gene3D - 265 340 IPR036638 GO:0046983
Lele17g0868 576 MobiDBLite consensus disorder prediction 249 283 - -
Lele17g0868 576 MobiDBLite consensus disorder prediction 535 557 - -
Lele17g0868 576 MobiDBLite consensus disorder prediction 252 283 - -
Lele17g0868 576 Pfam Helix-loop-helix DNA-binding domain 269 318 IPR011598 GO:0046983
Lele17g0868 576 MobiDBLite consensus disorder prediction 73 87 - -
Lele17g0868 576 MobiDBLite consensus disorder prediction 21 44 - -
Lele17g0868 576 MobiDBLite consensus disorder prediction 338 368 - -
Lele17g0868 576 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 265 338 IPR036638 GO:0046983
Lele17g0868 576 MobiDBLite consensus disorder prediction 48 68 - -
Lele17g0868 576 Coils Coil 314 334 - -
Lele17g0868 576 MobiDBLite consensus disorder prediction 156 195 - -
Lele17g0868 576 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 12 574 IPR044295 GO:0003700|GO:0006351|GO:0046983
Lele17g0868 576 MobiDBLite consensus disorder prediction 353 367 - -
Lele17g0868 576 CDD bHLH_AtBIM_like 266 342 - -
Lele17g0868 576 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 267 317 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0868 Lele-ChrLele17 19963431 19968887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0868 1 530 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 49.457 7.84e-124 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele17g0868 HLH 2.7e-15 No_clan