Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0865 ATGGAGGGCCATGAAGCTGAGAAACTCTATGCAGTACCTAGTTCAAGCTCAACCCAGAACCCCCAATTTGCTTCTGCAACAGAGAAACCCATCTTGAACATGGAAACAGTGGAAGAGTACCATGTCTTGGCTCATTTGGATCCATTTCAAAGCTCACATTACATTCCATTTTACTACTCACAAGTTCATCACCTTCCCAATAAATCCTCTCCAAACGCATCTCTTCACAGTAACAACAGCGAAGCAAAAGCTATTATTGTTGACGACCAGAAGAGAAGAAGAATGATTTCTAACAGAGAATCAGCGCGCAAATCGCGAATACGGAAGAAGCAACAAATTGAAGCTCTTCAGTGTCGTGTTAATGATCTGCAAGCTATGAATGATCAACTCTCTCGGAAGATCATCAGCTTACTGGAATGTAACCAGCAAATGCTGCAACAGAATGTTCAGCTTAAAGAGAAGGTTTCATCTCTGCAAGAAGCCCTCTCAGAAATGTTAATCCCCAATGGCCCCATAGCAGATTAA 525 0.4229 MEGHEAEKLYAVPSSSSTQNPQFASATEKPILNMETVEEYHVLAHLDPFQSSHYIPFYYSQVHHLPNKSSPNASLHSNNSEAKAIIVDDQKRRRMISNRESARKSRIRKKQQIEALQCRVNDLQAMNDQLSRKIISLLECNQQMLQQNVQLKEKVSSLQEALSEMLIPNGPIAD 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0865 174 Pfam bZIP transcription factor 90 148 IPR004827 GO:0003700|GO:0006355
Lele17g0865 174 SUPERFAMILY Leucine zipper domain 90 147 IPR046347 GO:0003700|GO:0006355
Lele17g0865 174 SMART brlzneu 86 150 IPR004827 GO:0003700|GO:0006355
Lele17g0865 174 Coils Coil 106 133 - -
Lele17g0865 174 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 93 108 IPR004827 GO:0003700|GO:0006355
Lele17g0865 174 Gene3D - 89 144 - -
Lele17g0865 174 SUPERFAMILY A DNA-binding domain in eukaryotic transcription factors 49 113 IPR008917 GO:0003677|GO:0006355
Lele17g0865 174 MobiDBLite consensus disorder prediction 1 24 - -
Lele17g0865 174 Coils Coil 141 161 - -
Lele17g0865 174 FunFam BZIP transcription factor 88 142 - -
Lele17g0865 174 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 88 137 IPR004827 GO:0003700|GO:0006355
Lele17g0865 174 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 27 169 IPR044521 -
Lele17g0865 174 CDD bZIP_plant_GBF1 91 139 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0865 Lele-ChrLele17 19945966 19946490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0865 45 168 bZIP Transcription Factor Family AT5G60830 43.609 5.21e-24 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele17g0865 bZIP_1 1.3e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0865 17 19945966 19946490 Lele19g0700 19 4060758 4061553 hybridization