Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0861 ATGATGAACATGGACTATGGTGGTGGCTATTCCTGTAGTTTGGTACGCCTCTGTGATTCTTGCAGATGGTCTGCTTCCACGCTTTACTGTCACACCGATTCAGCGTACCTCTGTTCTTCCTGCGATGGACAAATTCACGCTCTGGGGTCTCCTTGTTGGACCCACCATCGTGTGAATCTTTGCGGCACGTGTAAGAACGCTCCGGTGGCTTTCACCTGCAAGGCCGATGATGCTTCGCTATGTGTCCACTGTGACTTTGAAATTCACTCTGCTAACCCAATTGCTAGCCGACACAACAGAGTCCCTGCGTCTCCCCTGTCTCATATACTCAACGACAAAGTAGCAACTCCCGTTGACCAGCCTAATTACGAGGTTGTCGACAACAACAACAACGTAAGTAGCAAGGAAATGGACGAGCGAGAAACTGACTCGTGGTTACTGCTTGATTCTGCTGATACAATAGACAGCCAGCTTGATGATGGGTTTAAGTTCGGAGAAACAGAGGATGATCACCATGCGTACGTGGGGCTTGTTGAAGAGTGCGATTCATCCACTAAGTTCAAAAATTTCCAGGAAGATCATGAACAGGGGCAGCAAGCTTACAGCTTTTCTGAAGAGATGAACGAAAGTGACAGTGTTGTGCCAGTTCAATCGGTTGAAGCTCAGCCTAAGAAGCAATTGCAGCCACAACAGCAGCAGCAGGAGCAGAATATCTACTTCAATATGGAGCAGAAGCCATCAAGATCAGTGGCTTTCACTAATTACGCATCGAACTGCCGGAGCGTGTCTGTTCCATATGTGGATGCTCAAATGCGGCAAAGAGGGACGGCGAGTGGCATGCCAGCAGGGTACAGATTTGCCAAAGGAACAGAGATATTTGCAAGTGCTTCTTCCGTTCCAATGCAAATCCTCTTTGGGGAGATGAACAGGAAAGCTGGGGTGGAGAAATACAGAGAGAAGAAGAAATCTAGAAAGTTCGAGAAGAGAATCAGATATGCTTACAGGAAAGCCTACGCTGAGAAAAGACCCAGAGTTAAGGGCAGATTTGTTAAGAGACAAGACTTAACTTCAGACGAAGCTGTGCCTCTCCACTGA 1095 0.4758 MMNMDYGGGYSCSLVRLCDSCRWSASTLYCHTDSAYLCSSCDGQIHALGSPCWTHHRVNLCGTCKNAPVAFTCKADDASLCVHCDFEIHSANPIASRHNRVPASPLSHILNDKVATPVDQPNYEVVDNNNNVSSKEMDERETDSWLLLDSADTIDSQLDDGFKFGETEDDHHAYVGLVEECDSSTKFKNFQEDHEQGQQAYSFSEEMNESDSVVPVQSVEAQPKKQLQPQQQQQEQNIYFNMEQKPSRSVAFTNYASNCRSVSVPYVDAQMRQRGTASGMPAGYRFAKGTEIFASASSVPMQILFGEMNRKAGVEKYREKKKSRKFEKRIRYAYRKAYAEKRPRVKGRFVKRQDLTSDEAVPLH 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0861 364 Pfam B-box zinc finger 58 102 IPR000315 GO:0008270
Lele17g0861 364 Pfam CCT motif 310 352 IPR010402 GO:0005515
Lele17g0861 364 ProSiteProfiles CCT domain profile. 310 352 IPR010402 GO:0005515
Lele17g0861 364 ProSiteProfiles Zinc finger B-box type profile. 13 60 IPR000315 GO:0008270
Lele17g0861 364 ProSiteProfiles Zinc finger B-box type profile. 56 103 IPR000315 GO:0008270
Lele17g0861 364 CDD Bbox1_BBX-like 17 58 - -
Lele17g0861 364 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 18 354 IPR045281 GO:0009909
Lele17g0861 364 CDD Bbox1_BBX-like 60 102 - -
Lele17g0861 364 SMART bboxneu5 13 51 IPR000315 GO:0008270
Lele17g0861 364 SMART bboxneu5 56 103 IPR000315 GO:0008270
Lele17g0861 364 MobiDBLite consensus disorder prediction 204 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0861 Lele-ChrLele17 19920022 19921799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0861 11 352 C2C2-CO-like Transcription Factor Family AT3G02380 40.346 1.40e-64 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lele17g0861 zf-B_box 3.5e-06 No_clan