Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0860 ATGGGGTGCTCGTTTTCTGGGTTGAATGCTCTCTACGACGCCGTTAATGGAGGAGGGGATGTCTGGATCAATGAGAACCGATTCCGAATCGTCAGGCAGCTCGGGGAAGGTGGATTCGCCTTCGTTTATTTGGTTAAGGAGGTGGTCGCTGACTCCTCTCCCGCCTCTGCTGGCACTGGTCTTTCTAAGAAGCTCAAAGACTCCTCTCATGTCTCTGAAGATGGAACTTATGCTATGAAAAAGATCCTCATTCAGAATAGCGAACAGTTGGAGTTGGTGAGGGAGGAGATCCGGGTCTCATCGCTGTTTAGTCATCGAAATCTGCTCCCACTTCTTGACCATGCAATCATCTCTGTTAAGCCTACCCAAGAAACATCTTGGGACCATGAAGCATACTTGATATTTCCAGTTCATTTGGATGGAACGTTGCTAGACAATGCCAAAACAATGCAAGCCAAGAAGGAGTTCTATTCTACCTTTGATGTTCTTCAAATATTTCGGCAGCTTTGTGCAGGACTCGAGCATATGCACAGTTTAGATCCTCCATATGCACATAATGATGTCAAACCTGGAAATGTTATGATAACACATAGGAAAGGTCAGTCGCCTCTTGCCATACTGATGGATTTTGGCAGTGCACGACCTGCCAAGAGGCAAATTCGCTCCCGACAAGAGGCATTACAGCTACAGGAATGGGCAGCTGAACACTGCTCTGCTCCTTTCCGTGCTCCTGAGCTGTGGGATTGCCCAAGCCATGCTGATATTGATGAAAGGACTGATATTTGGTCACTGGGATGCACATTTTATGCGATAATGTATGGCGTATCTCCATTTGAATATGCACTTGGAGAATCTGGAGGAAGCCTGCAATTGGCCATTGTAAATGCTCAGGTCAAGTGGCCAGCTGGACCTAAGCCTCCATACCCAGAAGCTCTTCATCAGTTTGTGACATGGATGCTTCAGCCTCAGGCTGCTGTGAGGCCCCGGATAAATGATATTGTTATCCACGTGGATAAGCTGATTGCAAAGTTCTCTCCTTGA 1041 0.4707 MGCSFSGLNALYDAVNGGGDVWINENRFRIVRQLGEGGFAFVYLVKEVVADSSPASAGTGLSKKLKDSSHVSEDGTYAMKKILIQNSEQLELVREEIRVSSLFSHRNLLPLLDHAIISVKPTQETSWDHEAYLIFPVHLDGTLLDNAKTMQAKKEFYSTFDVLQIFRQLCAGLEHMHSLDPPYAHNDVKPGNVMITHRKGQSPLAILMDFGSARPAKRQIRSRQEALQLQEWAAEHCSAPFRAPELWDCPSHADIDERTDIWSLGCTFYAIMYGVSPFEYALGESGGSLQLAIVNAQVKWPAGPKPPYPEALHQFVTWMLQPQAAVRPRINDIVIHVDKLIAKFSP 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0860 346 ProSiteProfiles Protein kinase domain profile. 28 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0860 346 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 344 - -
Lele17g0860 346 CDD STKc_16 27 342 - -
Lele17g0860 346 SMART serkin_6 28 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0860 346 SUPERFAMILY Protein kinase-like (PK-like) 20 336 IPR011009 -
Lele17g0860 346 Pfam Protein kinase domain 58 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0860 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Lele17g0860 346 Gene3D Transferase(Phosphotransferase) domain 1 17 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0860 Lele-ChrLele17 19914714 19918695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0860 33 336 EF-hand Containing Proteins AT4G04710 25.000 7.95e-13 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Lele17g0860 Pkinase 6.4e-29 CL0016