Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0859 ATGAAATCAGGAGTCCAGGAAGGAATTTGGAATCTGATTTCACCGCAATTGGGTAACCAGGCTGATTTTTATTACCCTCCCCTGACTCTGTTGTATTCAATTCCTGGATCGCTCCAATTTCAACCAGAGTGCCAGGCACTCCGTTATTTGATTTGCTCACTCCTGTTGAAGGGCGTCAAGCCGTCAACTGAAAGATCTAACAAGTTCTTCACTCTCTTTCTCGAAAGCCATCCCTCCAGTGTTGATTACATAGCTGTTAAGTTTTGTTCAGACTTCGCACTACAGTTTGATATTTCCAGAACGTATATAAATTGTCCTTTTTGCCTGCCTATAACGTGGACATCTATAGTTTCCTTAATGGCACCACAAGATACTGCTTCTGTTGTTGAAATACCCCAGAGAACTCCTGGTTTACTGCGGGATCAGGTTCAGCTAGTCAAAAGAAAGGACTCTGATCGCTATGAAATTGTCTCAATCCCAGATTCTCTCTCATTTGAGAAAGGTTTCTTCATAGTTATTCGTGCATGCCAATTGCTGGCTCAAAAGAATGATGGGATAATATTAGTTGGAGTTGCTGGACCGTCTGGAGCTGGGAAGACAGTTTTCACCGAGAAGGTCCTCAGCTTTATGCCAAGCGTTGCTGTCATAACAATGGACAACTATAATGATTCTAGTCGAGTCATAGATGGCAACTTTGATGACCCTCGGCTGACAGATTATGATACATTGCTAGAAAATATAAAGGGTCTCAAAGCTGGCAAGCCAGTTCAGGTGCCAATATATGATTTCAAGTCTAGCTCTCGCATAGGCTACAGGACTATTGAAGTCCCTAGCTCCCGTATTGTCATCATAGAAGGCATCTATGCCTTGAGTGAAAAATTACGTCCTTTGCTAGATCTTCGGGTGTCTGTCACTGGAGGAGTACACTTTGACCTTGTCAAGCGGGTTTTGCGGGACATTCAACGTGCTGGTCAAGAGCCTGAAGAAATAATTCAACAAATTTCTGAAACGGTATACCCGATGTATAAAGCCTTTATTGAGCCAGATCTCCAAACAGCACATATAAAAATCATAAACAAGTTTAACCCATTCTCTGGATTCCAGAATCCCACCTACATATTGAAGTCAACAAAGGCTGTGACGGAGGATCAAATCAAAGCGGTTATTGCTGCCGAGCATACTGAAACCACAGAGGAAACATATGACATATATCTTCTACCACCTGGGGAAGATCCTGAAGCATGTCAATCATACTTGAGGATGAGAAACCGGGATGGAAAGTACAATCTTATGTTTGAGGAATGGGTTTCAGATAGTCCGTTCATTATATCTCCTAGAATTACTTTTGAGGTTAGCGTACGCCTTCTGGGAGGGTTGATGGCCTTGGGGTACACAATTGCAGCTATCCTGAAAAGAAACAGCCATATCTTTCATGATGATAAAGTATCCGTAAAAACCGATTGGTTGGAACAACTTAATCGCCTATATGTTCAGGTGCAAGGAAGAGATAGAAACTATGTTAAATCTGTGGCACAGAAACTGGAGTTGGATGGTTCATATGTTCCTCGAACCTACATTGAACAAATTCAGCTGGAGAAGCTTATAAATGATGTGATGGCATTGCCAGATGATCTGAAGACCAAACTCAGTATAGACGATGATGTGGTTTTGAGCCCCAAAGAAGCCCTTTCCAGAGCTTCTGCAGATAGGAGAATGAAGCACCTAAATCGCAATCTCTCACACTCATTTTCTAGCCAAAGAGACAAGAGTCTATCTAAGTTGACTAGATTAGCTATAAATAACAGAAGATTTGATGGACGTGCTCTAGAATCACCTGCAGCAATTGCAAACCAAGGAGTCATTACACAACTTTCTGATCAAATTTCTACATTAAATGAGAGAATGGATGAGTTCACATCCCGTATTGAAGAGCTGAATTCTAAGTTTGCTACCAGAAAAGTTTCCGCCAGTCAGCAGAACTTGGCTTTACAGGCTGAAGCTTGCAATGGTTCGGGACCCACTTCTCACTTCCTTACTGGGTTGGGTAATGGTTCATTGACTGGATCTCTGTTGCCTAATTCTTCATCATCTTCCCAACTGGCGAGGGAGTCCCCACTGATGGAAGAGGTTGTACTTATTGCACGGGGACAACGTCAAATCATGCATCAACTAGATAGTCTGAGCAATCTTTTGCATGAATACTTTGGAGAGAGAGCACGTCTAGGAAGAGCAAACCAAACAAGCAGGATGCTGCCTGATGTTGACTTCACCATCCCGCTTGTTCTGACTTTGGCAATTGGTGGCGTGTTTTTGTTCAAGAGTGTGACATCCCATAAATAA 2340 0.4248 MKSGVQEGIWNLISPQLGNQADFYYPPLTLLYSIPGSLQFQPECQALRYLICSLLLKGVKPSTERSNKFFTLFLESHPSSVDYIAVKFCSDFALQFDISRTYINCPFCLPITWTSIVSLMAPQDTASVVEIPQRTPGLLRDQVQLVKRKDSDRYEIVSIPDSLSFEKGFFIVIRACQLLAQKNDGIILVGVAGPSGAGKTVFTEKVLSFMPSVAVITMDNYNDSSRVIDGNFDDPRLTDYDTLLENIKGLKAGKPVQVPIYDFKSSSRIGYRTIEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIQQISETVYPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPTYILKSTKAVTEDQIKAVIAAEHTETTEETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVSDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRNSHIFHDDKVSVKTDWLEQLNRLYVQVQGRDRNYVKSVAQKLELDGSYVPRTYIEQIQLEKLINDVMALPDDLKTKLSIDDDVVLSPKEALSRASADRRMKHLNRNLSHSFSSQRDKSLSKLTRLAINNRRFDGRALESPAAIANQGVITQLSDQISTLNERMDEFTSRIEELNSKFATRKVSASQQNLALQAEACNGSGPTSHFLTGLGNGSLTGSLLPNSSSSSQLARESPLMEEVVLIARGQRQIMHQLDSLSNLLHEYFGERARLGRANQTSRMLPDVDFTIPLVLTLAIGGVFLFKSVTSHK 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0859 779 Gene3D - 374 534 - -
Lele17g0859 779 ProSiteProfiles CYTH domain profile. 369 531 IPR023577 -
Lele17g0859 779 CDD UMPK_like 188 360 - -
Lele17g0859 779 PRINTS Uridine kinase signature 186 203 - -
Lele17g0859 779 PRINTS Uridine kinase signature 309 319 - -
Lele17g0859 779 PRINTS Uridine kinase signature 253 268 - -
Lele17g0859 779 PRINTS Uridine kinase signature 345 358 - -
Lele17g0859 779 Gene3D - 187 367 IPR027417 -
Lele17g0859 779 Pfam CYTH domain 392 525 IPR023577 -
Lele17g0859 779 PANTHER URIDINE KINASE 137 544 - -
Lele17g0859 779 SUPERFAMILY CYTH-like phosphatases 382 528 IPR033469 -
Lele17g0859 779 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 357 IPR027417 -
Lele17g0859 779 Pfam Phosphoribulokinase / Uridine kinase family 189 357 IPR006083 GO:0005524|GO:0016301
Lele17g0859 779 Coils Coil 621 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0859 Lele-ChrLele17 19908292 19914615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0859 188 459 PRT Gene Family AT5G40870 25.177 1.46e-18 87.8