Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0852 ATGGCGGGTCGTAGAAGAAAGAGGCATAACTTTAGCAGAATCCATGCTTTTTCATGTGGGAAAGCGTCGTTTAATGGGGAGCATTCACAGATTGGAGGACCTGGGTTTTCAAGAATAGTATATTGCAACGACCCAGAACGAGCTGAGGCGAGTCTTATCAATTATGGTGATAACTACGTTAGAACAACAAAGTACTCTTTGGTTTCGTTTCTTCCTAAGTCATTGTTTGAGCAATTCAGAAGAGTCGCCAATTTATTTTTCCTCTTATGTGCAATCCTCGCTTTCTTCCCTGTCTCTCCTTGGGATTCACCTTTCAGCTCTGTTTTCCCTCTGGTGTTTGTTGTTGGTCTTACAATGGCCAAAGAGATTCTTGAGGATTGGAGGAGGAAGAAGCAGGATATTGAGATGAATAACAGAAAGGTTAAAGTACATCATGGAGGAGCTTTTGATTCTACTAAATGGAAGGATCTGAAAGTTGGAGATGTAGTAAAAGTGGAGAAAGATGAATTTTTTCCTGCTGATCTCATCTTTCTTTCATCAAGCTATGATGATTCAATTTGCTATGTCGAAACCACTAATCTTGATGGAGAAACAAACCTTAAACTGAAACAAGCATTGGAAGAAACTTCTAAGTTTCAAGAAGACTCAAGCTTTGAAAATTTCAAGGCCACTATTGCTTGTGAAGATCCGAATGCAAATTTGTACTCATTTATAGGAACTATGGAGATAGAAAGTCAACAATACCCTCTCTCACCTCAGCAATTACTTCTTAGGGACTCTAAGTTGAGGAACACAGATTTTATTTATGGTGTGGTAATTTTTACAGGTCATGATACAAAGGTTATGCAGAATTCAACAAAGCCTCCTTCAAAGAGAAGCAACATTGAGAGAAGGATGGATAAAATTGTCTACTTATTGTTCTGTTTGTTATTTGTGATTTCTTTTATTGGGTCTGTTTTCTTTGGGATTTATACAAGTGAAGACCTTGAAAATGGTAAAATGACAAGATGGTACCTTAGACCAGATGAGACTACAATTTTCTATGATCCAAAGAGAGCAGCAATTGCAGCAATGTTGCATTTCTTGACTTTCCTTATGTTGTATGGTTACTTCATTCCCATTTCCCTCTATGTGTCCATAGAAATTGTGAAGATTCTTCAGAGTTTTTTCATCAACCAAGACGTTCACATGTATTACGAGGAAACCGACAAGCCAGCGCACGCTCGTACCTCGAATTTGAACGAAGAACTTGGCCAAGTTGATACCATACTTACTGATAAAACAGGAACTTTGACTTGTAACTCCATGGAATTCATCAAATGTTCCATTGCTGGGGTTGCTTATGGACAAGGAGTTACAGAAGTGGAGAGAGCTCTAGCAAGAAGGAAAGGGTACCCTCTAGAAGAAGAAGATGACAATGTTGCAGAGATTGCTGAAGCAAAGCCATCTGTTAAAGGATTTAACTTTCTAGATGAAAGGATCATGAATGAGAATTGGGCTAACGAGCCTCATGCGAAAGTAATCCAAAACTTCTTAAGATTGCTGGCCATGTGCCATACTGCAATACCTGAAGTCGATGAAGAAACTGGTAAAGTTTCCTATGAAGCTCAATCACCAGATGAAGCAGCATTCGTGATTGCTGCCAGAGAACTAGGGTTTGAGTTCTATGAAAGGACACAGACGACCATTTTACTGCACGAGTTTGATCCTCTATCTGGAAGGAAGGTTGAAAGATCCTACAAACTTTTAAACATATTAGAGTTTAGCAGTGCAAGAAAGCGGATGTCTGTAATAGTAAGAGACGAGGACGGGAATCTACTGCTATTGTGCAAAGGAGCTGACAGTGTCATGTTTGAAAGACTTTCAAAGAATGGAAGAGAGTTTGAAGAGAAAACTAGGGAACACATTAATGAGTACGCTGATGCTGGTCTGAGGACATTGATACTCGCGTATCGTGAACTTGATGAAGAAGAATACAACCAATTTAACAACGAATTCACAGAGGCCAAGAACATAGTGAGTGCAGATCGGGAGCAGATTGTAGAAGAAATAGCAGAACAGATTGAGAAGGATCTAATTCTTCTTGGTGCTACTGCTGTTGAAGACAAAGTTCCAGAATGCATCGACAAGCTTGCGCAGGCTGGAATCAAGCTCTGGGTTTTGACTGGTGATAAAATGGAGACAGCAATCAATATTGGATTTGCTTGTAGCTTACTAAGACAAGGAATGAAACAGATTATAATTAGTTCTGAAACTCCAGAAATCAAATCACTGGAGAAATTGGAGGACAAGTCTGCTTCTGCTGAGGCAATTAAGGCAAGTGTTCTTCATCAGATTCAAGAGGGGAAGGCGTCATTATCTACATCAGATGAAAATTGTGAGGCATTTGCTCTGATCATTGATGGGAAATCTCTCACTTATGCGTTGGAAGACGACGCGAAGGACATGTTTCTTGAACTCGCCATCGGCTGCGCATCTGTCATATGCTGTCGTTCATCTCCCAAACAGAAAGCACTTGTTACGAGGCTAGTTAAGACTAAAACTGGTAGTACAACTCTAGCAATTGGTGATGGAGCAAATGATGTTGGGATGCTCCAAGAAGCCGACATTGGAATCGGTATCAGCGGTGTCTGTTACTTCTTCTACAAGAACATTACTTTTGGCTTCACCCTCTTCTTCTTTGAGATATATGCATCGTTCTCCGGACAACCAGCTTACAATGATTGGTTTTTATCCCTGTATAATGTATTCTTCACATCACTTCCAGTGATTGCATTAGGAGTGTTTGATCAAGATGTCTCAGCAGAATTATGTCTCAAGTTTCCATTGTTATACCAAGAAGGTGTGCAAAATATCCTGTTCAGTTGGACTAGGATACTTAGCTGGCAATTCAACGGAGTGTTAAGTGCCACTCTGATTTTCTTCTTCTGCATCAGTGCACTGGAGAGTCAAGCCTTCCGAAGAGGCGGCGAAGTCGTCGGACTCGAGATCCTCGGCGCCGCCATGTACACTTGTGTAGTGTGGGTGGTGAATTGCCAAATGGCATTATCTATCAATTACTTCACTTTCATACAGCATATTTTCATTTGGGGTAGCATTCTTTTCTGGTATATATTCCTTCTGGCTTATGGAGCCATGGATCCAACCATATCAACCACTGCTTATAAGGTCTTCATCGAAGCCTGCGCACCGACACCGTCTTACTGGCTCGTCACTTTACTTGTTCTTGTTACATGTCTCATTCCATATTTCGTCTGTGCTTCAATAAAGATGAGGTTTTTTCCATCATACCATCAAATGATACGTTGGATCAGTAACGATGGCCAAGTACATGATCCAGAATATTGTAATGTGGTCCGGTCCAGATCGATACGCCACACGACCGTTGGGTTCACGGCTCGGTTTGAAGCATCCAAACGGTTTGAAGAGAAGTCTGTATCTGCAGAGAGCATCCCTTAA 3459 0.4088 MAGRRRKRHNFSRIHAFSCGKASFNGEHSQIGGPGFSRIVYCNDPERAEASLINYGDNYVRTTKYSLVSFLPKSLFEQFRRVANLFFLLCAILAFFPVSPWDSPFSSVFPLVFVVGLTMAKEILEDWRRKKQDIEMNNRKVKVHHGGAFDSTKWKDLKVGDVVKVEKDEFFPADLIFLSSSYDDSICYVETTNLDGETNLKLKQALEETSKFQEDSSFENFKATIACEDPNANLYSFIGTMEIESQQYPLSPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVMQNSTKPPSKRSNIERRMDKIVYLLFCLLFVISFIGSVFFGIYTSEDLENGKMTRWYLRPDETTIFYDPKRAAIAAMLHFLTFLMLYGYFIPISLYVSIEIVKILQSFFINQDVHMYYEETDKPAHARTSNLNEELGQVDTILTDKTGTLTCNSMEFIKCSIAGVAYGQGVTEVERALARRKGYPLEEEDDNVAEIAEAKPSVKGFNFLDERIMNENWANEPHAKVIQNFLRLLAMCHTAIPEVDEETGKVSYEAQSPDEAAFVIAARELGFEFYERTQTTILLHEFDPLSGRKVERSYKLLNILEFSSARKRMSVIVRDEDGNLLLLCKGADSVMFERLSKNGREFEEKTREHINEYADAGLRTLILAYRELDEEEYNQFNNEFTEAKNIVSADREQIVEEIAEQIEKDLILLGATAVEDKVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSETPEIKSLEKLEDKSASAEAIKASVLHQIQEGKASLSTSDENCEAFALIIDGKSLTYALEDDAKDMFLELAIGCASVICCRSSPKQKALVTRLVKTKTGSTTLAIGDGANDVGMLQEADIGIGISGVCYFFYKNITFGFTLFFFEIYASFSGQPAYNDWFLSLYNVFFTSLPVIALGVFDQDVSAELCLKFPLLYQEGVQNILFSWTRILSWQFNGVLSATLIFFFCISALESQAFRRGGEVVGLEILGAAMYTCVVWVVNCQMALSINYFTFIQHIFIWGSILFWYIFLLAYGAMDPTISTTAYKVFIEACAPTPSYWLVTLLVLVTCLIPYFVCASIKMRFFPSYHQMIRWISNDGQVHDPEYCNVVRSRSIRHTTVGFTARFEASKRFEEKSVSAESIP 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0852 1152 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Lele17g0852 1152 CDD P-type_ATPase_APLT_Dnf-like 57 977 - -
Lele17g0852 1152 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 107 211 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele17g0852 1152 Pfam E1-E2 ATPase 136 327 - -
Lele17g0852 1152 FunFam Phospholipid-transporting ATPase 695 880 - -
Lele17g0852 1152 Pfam Phospholipid-translocating ATPase N-terminal 40 101 IPR032631 -
Lele17g0852 1152 Gene3D - 462 700 IPR023299 GO:0000166
Lele17g0852 1152 SFLD Haloacid Dehalogenase 406 876 - -
Lele17g0852 1152 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 697 IPR023299 GO:0000166
Lele17g0852 1152 Pfam Phospholipid-translocating P-type ATPase C-terminal 877 1096 IPR032630 -
Lele17g0852 1152 FunFam Phospholipid-transporting ATPase 117 286 - -
Lele17g0852 1152 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Lele17g0852 1152 PRINTS P-type cation-transporting ATPase superfamily signature 855 874 - -
Lele17g0852 1152 SUPERFAMILY HAD-like 419 876 IPR036412 -
Lele17g0852 1152 Coils Coil 117 137 - -
Lele17g0852 1152 FunFam Phospholipid-transporting ATPase 537 695 - -
Lele17g0852 1152 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 876 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele17g0852 1152 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 877 1106 - -
Lele17g0852 1152 Pfam Cation transport ATPase (P-type) 518 622 - -
Lele17g0852 1152 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 1095 IPR023298 -
Lele17g0852 1152 SUPERFAMILY Calcium ATPase, transduction domain A 138 284 IPR008250 -
Lele17g0852 1152 Gene3D - 119 286 - -
Lele17g0852 1152 Gene3D - 400 877 IPR023214 -
Lele17g0852 1152 SFLD p-type atpase 406 876 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0852 Lele-ChrLele17 19865423 19870464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0852 10 1140 Primary Pumps ATPases AT1G68710 67.026 0.0 1679