Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0828 ATGAACAGAGCTGCGTTTGCCCCAATGGCGGACTTTTTTTACCCTTGGCGTTTGATGATTGTCTTCTTCGTCTCGCTTCTGCTTCTGAGTGTGAGAGTCAGTACGGAGCCGACTCAGGACAAGCAAGCCCTCCTTGCCTTCATCTCTCGGACCCCACACGCCAATCGCGTCCAATGGAACGCCTCCGACTCTGCCTGCAACTGGGTTGGGGTCGAATGTGATGCTTCTCGTTCCTTCGTCTTCGCTCTTCGTCTTCCCGGCGTTGGCCTTTTGGGCGGGATTCCTCCCAACACTATTGGTCGTCTCACTCAGCTACGGGTTCTCAGTCTCCACTCCAATGGTCTCGCCGGCGAGATCCCTGCCGATTTCTCTAATTTGACGTTGCTTCGTAACTTGTACCTCCAGGATAACCAGTTCTCTGGTGGGTTTCCTTCATCTCTGACTCAGGTGGGTCGTTTGACCCGCTTGGATCTCTCGTCGAACAAGTTTACGGGTCCAATCCCTTTCTCAATCAACAATTTGACCCACTTGACTGGTCTATTCTTGCAAAGCAATGGATTCTCGGGCAATCTACCGAGCGTGAGTGCCAAATTGGCAGGCTTCAATGTTTCTAATAATCAGCTTAATGGTTCGATCCCCAAATCTCTCTCGAATTTCCCAGCATCCTCATTCGCCGGAAACTTAGATCTCTGCGGTGGACCATTGCCGCCATGTACCCCATTCTTCCCGTCCCCGGCACCGTCACCTTCCGCCCCCGTCGGGCCCTCTTCCCCGGCTCACAAAAAGTCCAAGAAGCTCTCAAAAGGCGCCATTATCGGAATTGCAGTTGGGTGTTCTCTGGCGGCCTTGTTACTCCTCCTGCTTCTGCTTCTCCTCTGCCTGGGCAAACGCCGGCGAAGCCAACCAGCGAAGCCGCCGAAGCCAGTGGTGGCGACGCGTGCTGCGCCGGCGGAGGCCGGAACATCGTCTTCAAAAGACGATATCACCGGTGGGTCCGTGGAGGCCGAGAGGAACAAGTTGGTGTTCTTCGAAGGAGGGATATACAGCTTCGATTTGGAAGATCTGTTGAGAGCTTCAGCAGAAGTTCTGGGCAAGGGAAGCGTCGGAACATCGTACAAGGCGGTGCTGGAAGAAGGAACCACAGTGGTGGTGAAGAGATTAAAAGACGTCGCCGTAACAAAGAAAGACTTCGATGCTCAAATGGAGGTTCTGGGCAAGATTAAGCACGAGAATGTGGTTCCTCTCAGAGCTTACTATTACTCCAAAGATGAGAAATTACTCGTCTACGATTACCTCCCTTCTGGTAGCTTGTCTGCTCTGCTTCACGGGAGTAGAGGGTCAGGGAGGACGCCGCTTGACTGGGAGAGCCGAATGAGAATAGCGCTAGGTGCCGCTAGGGGGTTGCTTCACCTACACGTGTCAGGAAAAGTGGTCCACGGCAACATAAAAGCCTCCAACGTGCTCCTTCGAGGAAACGACAATGAGGCCTGCGTTTCGGACTTCGGCCTTAACCCGTTGTTCGCCAACACCACCCCATCCAACCGGGTGGCGGGATATCGGGCACCCGAAGTCCTCGAAACCCGGAAAGTCACTTTCAAATCCGACGTGTACGGCCTCGGGGTTTTGCTGCTGGAGCTCCTCACCGGGAAGGCGCCGAACCAGGCGTCGTTGGGTGAGGAGGGGATTGACCTCCCGAGATGGGTTCTGTCGGTGGTCCGAGAAGAATGGACGGCGGAGGTGTTCGACGCGGAGCTCATGAGGTACCACAATATAGAGGAAGAGATGGTTCAGCTGTTACAGATAGCCATGGCGTGCGTATCGGTGGTCCCCGATCAGAGACCCACCATGCAGGAGGTAGTCCGGATGATGGAGGAGATCAACAGGAGCGAGACGGACGAGGGGTTGCGGCAGTCGTCGGACGATCCATCCAGGGGATCGGAAGGTCAAACGCCGCCGGCCGAATCAAGAACTCCGCCGAGATCAATCACGCCTTAA 1995 0.5499 MNRAAFAPMADFFYPWRLMIVFFVSLLLLSVRVSTEPTQDKQALLAFISRTPHANRVQWNASDSACNWVGVECDASRSFVFALRLPGVGLLGGIPPNTIGRLTQLRVLSLHSNGLAGEIPADFSNLTLLRNLYLQDNQFSGGFPSSLTQVGRLTRLDLSSNKFTGPIPFSINNLTHLTGLFLQSNGFSGNLPSVSAKLAGFNVSNNQLNGSIPKSLSNFPASSFAGNLDLCGGPLPPCTPFFPSPAPSPSAPVGPSSPAHKKSKKLSKGAIIGIAVGCSLAALLLLLLLLLLCLGKRRRSQPAKPPKPVVATRAAPAEAGTSSSKDDITGGSVEAERNKLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVAVTKKDFDAQMEVLGKIKHENVVPLRAYYYSKDEKLLVYDYLPSGSLSALLHGSRGSGRTPLDWESRMRIALGAARGLLHLHVSGKVVHGNIKASNVLLRGNDNEACVSDFGLNPLFANTTPSNRVAGYRAPEVLETRKVTFKSDVYGLGVLLLELLTGKAPNQASLGEEGIDLPRWVLSVVREEWTAEVFDAELMRYHNIEEEMVQLLQIAMACVSVVPDQRPTMQEVVRMMEEINRSETDEGLRQSSDDPSRGSEGQTPPAESRTPPRSITP 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0828 664 FunFam Probable inactive receptor kinase RLK902 37 195 - -
Lele17g0828 664 SUPERFAMILY Protein kinase-like (PK-like) 361 624 IPR011009 -
Lele17g0828 664 MobiDBLite consensus disorder prediction 625 664 - -
Lele17g0828 664 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 432 637 - -
Lele17g0828 664 Gene3D Ribonuclease Inhibitor 198 238 IPR032675 -
Lele17g0828 664 FunFam pollen receptor-like kinase 1 327 431 - -
Lele17g0828 664 MobiDBLite consensus disorder prediction 625 640 - -
Lele17g0828 664 PANTHER OS05G0588300 PROTEIN 20 636 - -
Lele17g0828 664 ProSiteProfiles Protein kinase domain profile. 357 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0828 664 Pfam Leucine rich repeat N-terminal domain 38 74 IPR013210 -
Lele17g0828 664 Gene3D Transferase(Phosphotransferase) domain 1 432 645 - -
Lele17g0828 664 MobiDBLite consensus disorder prediction 299 330 - -
Lele17g0828 664 Pfam Protein kinase domain 360 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0828 664 MobiDBLite consensus disorder prediction 641 664 - -
Lele17g0828 664 Gene3D Ribonuclease Inhibitor 37 197 IPR032675 -
Lele17g0828 664 SUPERFAMILY L domain-like 47 219 - -
Lele17g0828 664 Gene3D Phosphorylase Kinase; domain 1 325 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0828 Lele-ChrLele17 19683385 19686135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0828 18 644 Receptor kinase-like Gene Family AT5G58300 54.016 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele17g0828 Pkinase 2.8e-37 CL0016