Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0819 ATGCTCGTACGACACCGTACGGTTCCTTGCCATTTGGGGGTCCCACCCCGGCAAGAAGTCACCCGCTTGCAATTTACTGGATTACTAGAATTTACTGGATTATCTTCTTCAAGAATGGATAAGAAAAAGGTGGCGGTTCCACTTGTTTGCCACGGTCATTCCCGGCCTGTAGTGGATCTTTTCTACAGTCCTGTTACGCCTGACGGATTCTTCCTCATTAGTGCAAGCAAAGATTCTAGTCCTATGCTCAGAAATGGAGACACTGGAGATTGGATTGGTACATTTGAAGGGCACAAAGGTGCGGTATGGAGTTGCTGCTTGGATACAAATGCTTTACGTGCTGCAACTGCCTCTGCTGATTTCTCATCGAAAGTTTGGGATGCATTAACAGGAGATGAATTACACTCGTTTGAACACAAGCACATTGTTCGTGCATGTGCTTTTTCTGAGGATACACACCTTTTACTAACTGGGGGAGTAGAGAAAATTCTCCGAATCTATGACTTGAATCGTCCTGATGCACCACCCAGAGAAGTTGACAAGTCTCCTGGTTCAATCAGAACTGTTACATGGCTTCATAGTGACCAGACAATATTAAGTTCTTGTACTGATATGGGAGGTGTCAGGTTATGGGATATAAGAAGTGGTCAAATAGTCCAGACACTTGAGACCAAGTCATCCGTGACCAGTGCTGAAGTGAGTCAGGATGGTCGTTACATTGTAACTGCAGATGGTTCTACAGTTAAATTTTGGGATGCAAATCACTATGGGTTGGTGAAGAGTTATGATATGCCTTGCACTGTTGAATCAGCTTCGTTGGAACCTAAGTATGGGAATAAATTTGTTGCTGGGGGAGAAGATATGTGGGTTCGTGTTTTTGATTTCCATACTGGCCATGAGATTGCGTGCAACAAGGGTCACCATGGTCCTGTGCACTGTGTACGTTTCTCTCCTGGGGGAGAATCATATGCCTCAGGATCTGAGGACGGAACCATAAGAATATGGCAAACTGGTCCTTTGACCCATGAGGAGTCGGAGTCTGTATCTGCAAATGGATCACTTGCCAAGGTTAAGGTTAATGCAGACGAGGTTTCACGCAAGATTGAGGGGTTTCATATTTCAGATGAGGGGAAATCCAAAGAAAAGGAAGAGGCAGGCGAGGAATAA 1167 0.4499 MLVRHRTVPCHLGVPPRQEVTRLQFTGLLEFTGLSSSRMDKKKVAVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGDTGDWIGTFEGHKGAVWSCCLDTNALRAATASADFSSKVWDALTGDELHSFEHKHIVRACAFSEDTHLLLTGGVEKILRIYDLNRPDAPPREVDKSPGSIRTVTWLHSDQTILSSCTDMGGVRLWDIRSGQIVQTLETKSSVTSAEVSQDGRYIVTADGSTVKFWDANHYGLVKSYDMPCTVESASLEPKYGNKFVAGGEDMWVRVFDFHTGHEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPLTHEESESVSANGSLAKVKVNADEVSRKIEGFHISDEGKSKEKEEAGEE 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0819 388 MobiDBLite consensus disorder prediction 368 388 - -
Lele17g0819 388 Pfam WD domain, G-beta repeat 216 252 IPR001680 GO:0005515
Lele17g0819 388 Pfam WD domain, G-beta repeat 132 168 IPR001680 GO:0005515
Lele17g0819 388 Pfam WD domain, G-beta repeat 92 127 IPR001680 GO:0005515
Lele17g0819 388 Pfam WD domain, G-beta repeat 304 335 IPR001680 GO:0005515
Lele17g0819 388 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 304 336 - -
Lele17g0819 388 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 45 379 - -
Lele17g0819 388 Gene3D - 47 358 IPR015943 GO:0005515
Lele17g0819 388 CDD WD40 52 336 - -
Lele17g0819 388 SUPERFAMILY WD40 repeat-like 42 339 IPR036322 GO:0005515
Lele17g0819 388 FunFam Serine-threonine kinase receptor-associated protein 46 359 - -
Lele17g0819 388 SMART WD40_4 43 85 IPR001680 GO:0005515
Lele17g0819 388 SMART WD40_4 297 336 IPR001680 GO:0005515
Lele17g0819 388 SMART WD40_4 215 252 IPR001680 GO:0005515
Lele17g0819 388 SMART WD40_4 255 294 IPR001680 GO:0005515
Lele17g0819 388 SMART WD40_4 130 168 IPR001680 GO:0005515
Lele17g0819 388 SMART WD40_4 88 127 IPR001680 GO:0005515
Lele17g0819 388 SMART WD40_4 172 212 IPR001680 GO:0005515
Lele17g0819 388 ProSiteProfiles Trp-Asp (WD) repeats profile. 95 136 IPR001680 GO:0005515
Lele17g0819 388 ProSiteProfiles Trp-Asp (WD) repeats profile. 136 170 IPR001680 GO:0005515
Lele17g0819 388 ProSiteProfiles Trp-Asp (WD) repeats profile. 304 336 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0819 Lele-ChrLele17 19622558 19625988 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0819 29 334 Eukaryotic Initiation Factors Gene Family AT2G46290 28.116 3.09e-39 141