Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0815 ATGTCGAAATACGATGAGATAGAACTATCAAGAGAAGCAAACTATTTCAGTTTATCTACTGGTATTTTGCCTTCACTTGGAGCCAGCCATGCACCCAGAATCAGCCTCAAAACCTGCATTATCTCTCCTTATGATCGTCGTTACAGGTTGTGGGAGAACTTTCTGATTCTTCTGGTGGGGTACACCGGATGGGTATCGCCATTTGAGTTCGGCTTCCTTGACACGCCAGTAGGGTTCCTCTCGATCTCAGACAATGTTGCGAATGGACTCTTCGCGGTGGATATAATTCTCACCTTCTTCGTCGCTTACATTGACAAAGTCACCTTCCTCTTGGTTGAAGATCGAACAGCCATTGCCTCCAAATATCTCAAGACTTGGTTCGTCTTCGATGTCATCTCCATTATCCCTTCCGAGCTCGCTCGCAAGGTTCCCATCTCACCATTTCAATCCTATGGACCTTTCAACATGCTTCGCCTCTGGCGAATTCGAAGAGTTAGTGCCCTGTTTGCTAGACTGGAGAAGGACATAAACTATAACTATTTCTGGGTTCGGTGTGCTAAGCTTATCTGTGTCACCATCTTTGCTGTTCACTTAGCTGGATGCTTCTTCTATTATATTGCTGCACATCATGCAGATCCTAAACAGACTTGGATCGGGCTATCATTGGAAGACTTCCATCAAGAGAGCTTGTACACAAAATATGTGTATTCTATGTACTGGTCTATTACTACGTTAGCAACTGTTGGCTATGGCGATTTGCATCCAGTGAATACGTCAGAAATGGTCTTTGACATCTTTTACATGTTCTTCAATCTGGGTTTAACGTCCTATTTGATTGGTAATATGACCAACTTAATTGTCAATGGCACAAGTCGGACCAGTAGATTTAGGGATACCATACAAGCTGCCTCAAATTTTGCGGAAAGGAACCATTTGCCTGCTCGTTTGAAAGATCAGATGCTTGAACACATGTGTTTGAGGTTCAGAACAGACTCAGAGGGATTGCAGCATCACGAGAGCCTCGATACTCTTCCTAAAGCCATCAGATCAAGCATTTCACGTAATCTTTTTTACTCTGTGGTGGATGATGTCTACCTGTTTTCTGGAGTTTCAAAGAACTTGCTTTTTCAACTGGTAATAGAGATGAAAGCAGAGTATTTCCCCCCGAGAGAAGATGTTATCTTGCAGAACGAAGAACCGACTGATCTTTATATATTAGTCACTGGTGCTGTGGTCGTAGGCGAGGCAACAGCTGGTAATGTTATCGGCGAGATCGGAGTGCTTTGCTATAGACTACAGCCCTTTACCGTTCGAACCAAGAGATTGAGCCAGCTACTGAGGCTGAACCGCACTACATTTCTAAATTCTATTCAAGCCAACGTGGGAGATGGGAACGTAATCATGAATAATCTCCTTCAGCATTTGAAAGAACTTAAGGACCCATTTATGGACGGAATTCTAGTGACTACAGAGAACTTGCTAGCTAGTGGTAGGGTGAACCTGCCACTTAGTCTCTCCTTTGCTGCATTAAGAGGAGATGACTGGTTGTTGCATCAATTGTTGAATCGGGGCTTGGATCCAAATGACTCCGACAACAAAGGAAGGACTGCTTTGCATATAGCAGCATCCAAAGGAAGCTTGGACCATGTCATGGTTCTTTTGGACCATGGGGCATATCCAAACATTAGAGATTATGATGGTAGTGTCCCATTATGGGAGGCAATAGCGGGGAGCCACGAATCTGTGAGCAAGGTGTTAGTAGAAAATGGCGCTAATTTAGAATGTGGAGATGTGGGTCAATTTGCATGCATTGCGACTGAGCAGGGTAATCTGAACTTGCTCAAGGATATAGTGAAACATGGAGGAGATATATCAAATTCTAGGAATTATGATGGGACCACAGCATTACATATTGCTGTCTGTGAAGGCAATGTTGAGATTGTCAAGTTCCTTTTGGATCATGGGGCTGACATTGATAAACCAGACAAGAATGGTTGGAAGCCAAGAGCTCTAGCAGATCAGCAGGGACATGAGGAAATTAAGGCTATGTTTGAGTCTATTGTGGAGCCTAAGGCTCCAACTCCAGCCAATTCTACTCCTGAGAGGTCTGTTGGAAGAATTGCAAGAACTGGGAAGCACCATGGAAATCACCAAGCAAGAGTAACAATTAGTTGCCCTGAAAATGTTGAAGTTGCAGGAAAAATTGTGCTTCTACCAGGGAACTTTAAGGATCTAATTGAGATTGGAGCTAATAGATTTGGTATTAATCCTGCTAGGATTCTAAGCAGGGATGGAGCTGAAATTGAAGATGTAGATGTGATTAGAGATGGTGATCATCTTTTGTTTGTCAGTTCTGAAAAGATCTGA 2367 0.4326 MSKYDEIELSREANYFSLSTGILPSLGASHAPRISLKTCIISPYDRRYRLWENFLILLVGYTGWVSPFEFGFLDTPVGFLSISDNVANGLFAVDIILTFFVAYIDKVTFLLVEDRTAIASKYLKTWFVFDVISIIPSELARKVPISPFQSYGPFNMLRLWRIRRVSALFARLEKDINYNYFWVRCAKLICVTIFAVHLAGCFFYYIAAHHADPKQTWIGLSLEDFHQESLYTKYVYSMYWSITTLATVGYGDLHPVNTSEMVFDIFYMFFNLGLTSYLIGNMTNLIVNGTSRTSRFRDTIQAASNFAERNHLPARLKDQMLEHMCLRFRTDSEGLQHHESLDTLPKAIRSSISRNLFYSVVDDVYLFSGVSKNLLFQLVIEMKAEYFPPREDVILQNEEPTDLYILVTGAVVVGEATAGNVIGEIGVLCYRLQPFTVRTKRLSQLLRLNRTTFLNSIQANVGDGNVIMNNLLQHLKELKDPFMDGILVTTENLLASGRVNLPLSLSFAALRGDDWLLHQLLNRGLDPNDSDNKGRTALHIAASKGSLDHVMVLLDHGAYPNIRDYDGSVPLWEAIAGSHESVSKVLVENGANLECGDVGQFACIATEQGNLNLLKDIVKHGGDISNSRNYDGTTALHIAVCEGNVEIVKFLLDHGADIDKPDKNGWKPRALADQQGHEEIKAMFESIVEPKAPTPANSTPERSVGRIARTGKHHGNHQARVTISCPENVEVAGKIVLLPGNFKDLIEIGANRFGINPARILSRDGAEIEDVDVIRDGDHLLFVSSEKI 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0815 788 Pfam Ankyrin repeats (3 copies) 604 661 IPR002110 GO:0005515
Lele17g0815 788 Pfam Ankyrin repeats (3 copies) 505 595 IPR002110 GO:0005515
Lele17g0815 788 SUPERFAMILY Ankyrin repeat 468 685 IPR036770 -
Lele17g0815 788 SMART ANK_2a 500 529 IPR002110 GO:0005515
Lele17g0815 788 SMART ANK_2a 533 562 IPR002110 GO:0005515
Lele17g0815 788 SMART ANK_2a 631 660 IPR002110 GO:0005515
Lele17g0815 788 SMART ANK_2a 597 626 IPR002110 GO:0005515
Lele17g0815 788 SMART ANK_2a 566 595 IPR002110 GO:0005515
Lele17g0815 788 ProSiteProfiles Ankyrin repeat profile. 631 663 IPR002110 GO:0005515
Lele17g0815 788 FunFam Potassium channel KAT3 50 288 - -
Lele17g0815 788 Gene3D Jelly Rolls 330 479 IPR014710 -
Lele17g0815 788 ProSiteProfiles Ankyrin repeat region circular profile. 533 564 - -
Lele17g0815 788 PRINTS Ankyrin repeat signature 534 549 IPR002110 GO:0005515
Lele17g0815 788 PRINTS Ankyrin repeat signature 647 661 IPR002110 GO:0005515
Lele17g0815 788 ProSiteProfiles cAMP/cGMP binding motif profile. 366 474 IPR000595 -
Lele17g0815 788 Pfam KHA, dimerisation domain of potassium ion channel 720 782 IPR021789 -
Lele17g0815 788 SUPERFAMILY cAMP-binding domain-like 291 475 IPR018490 -
Lele17g0815 788 PANTHER POTASSIUM CHANNEL AKT1 16 784 IPR045319 GO:0005249|GO:0006813
Lele17g0815 788 CDD CAP_ED 366 460 IPR000595 -
Lele17g0815 788 PRINTS EAG/ELK/ERG potassium channel family signature 84 94 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele17g0815 788 PRINTS EAG/ELK/ERG potassium channel family signature 278 287 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele17g0815 788 PRINTS EAG/ELK/ERG potassium channel family signature 234 251 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele17g0815 788 PRINTS EAG/ELK/ERG potassium channel family signature 95 104 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele17g0815 788 PRINTS EAG/ELK/ERG potassium channel family signature 260 271 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele17g0815 788 ProSiteProfiles Ankyrin repeat region circular profile. 631 663 - -
Lele17g0815 788 Pfam Ion transport protein 49 293 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele17g0815 788 Gene3D - 53 288 - -
Lele17g0815 788 SUPERFAMILY Voltage-gated potassium channels 43 287 - -
Lele17g0815 788 ProSiteProfiles Ankyrin repeat profile. 533 565 IPR002110 GO:0005515
Lele17g0815 788 ProSiteProfiles Ankyrin repeat profile. 566 598 IPR002110 GO:0005515
Lele17g0815 788 FunFam Potassium channel KAT2 354 479 - -
Lele17g0815 788 Gene3D - 502 686 IPR036770 -
Lele17g0815 788 SMART cnmp_10 366 472 IPR000595 -
Lele17g0815 788 ProSiteProfiles KHA domain profile. 720 788 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0815 Lele-ChrLele17 19606157 19609768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0815 97 784 Ion Channels AT2G26650 60.212 0.0 926