Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0805 ATGGCCACCACCAAGGCCATAATAGCCAGAGACGAATCCGATTATGATAGTAGCTCCTCCTCCCTCACCACTCTCCCAGAATCCAGCCGGAGCTGGATGACCAACCTGAGCTTCAGCAGCCGCCGTCGCAGCAGCTCCGTCTCCGTTTGTTCCTCCACCACCACAGACACCACCACCTCCTCTCTGTTCCTCGGCTCCCACGCCAAGAAGCCTCACAAGGCCAACCATGCAGCATGGGAGGCCATGTCCCGCCTTCGCCGCGACAGCAACGGCCAACTCGGCCTCCACCACTTCCGTCTTCTCCGGCGACTCGGCGGCGGCGACATCGGCAACGTCTACCTCTGCCAGATTAGGAACCCCCTCGTTGTTGGGTCGAAACAGAGCCTCTACGCCATGAAAGTGGTCGACAGAGAAGCGCTTTCTGTGAGAAACAAGTTGCAGAGAGCTGTGATGGAGAAGGAGATTCTGGGCATGCTTGATCACCCATTCTTGCCCACTTTATATGCTGAGTTTGAAGCCTCTCATTACTCTTGCTTGGTCATGGAGTTCTGTCCCGGTGGTGATTTGTATGCTTCTCGCCAGCGTCAACCGGGGAAACGATTCAGCATTCAATCGACCAAGTTTTATGCAGCTGAGACGCTGTTGGCTTTGGAATATCTTCACATGATGGGCATAGTGTATAGAGACTTGAAGCCTGAGAATGTGCTGGTAAGAGAGGATGGGCACATTATGCTCTCTGATTTTGATCTCTCTCTCAAATGCGACGTCGTTCCAAAGCTCTTGAGAAGCAAATCCAGTTTCAAAACTATTCCAAGGAGCTCTTCAACATCTCCTGCCTGTGCTGCCCCTATGCAATCTTGTTTCTCATCAGCATCATTTCGCAGCAAGAGCAAGAGAGAAAGTAGAGTCACAACAATCATAAGGGAAAATGTTGGAGTCCAAAAAGAACAAGCACGAAAAGAAGATGATGATGAAGAAGACGACATTGATGAAGATGATGATGATCAGCCTGAGCTAGTTGCAGAGCCTATAAATGCTAAGTCTATGTCATTTGTAGGTACTCATGAGTACTTAGCACCAGAAGTTATCTCAGGGCAAGGCCATGGAAGTGCAGTGGATTGGTGGACTTTTGGAGTGTTCTTATATGAGATGTTATATGGAAGAACCCCATTCAAAGGTGAGAACAATGGGAAAACACTCATAAACATCCTGAAGCAGCCATTGGCTTTTCCCAGAATTGCAGCAAGCAGCAGCAAGGAGTATGAAGAGATGGTCAGAGTTCAAGACCTGATAAGCAAACTATTAGTGAAGAATCCAAAGAAGAGAAGTGGAAGCTGCATGGGTTCTGTTGAAATCAAGAGGCATGGGTTCTTCAAAGGTGTGAATTGGGCTCTGATTAGATCAATTAAACCTCCTGAGGTTCCTGCTGATATGAACAAGATTAGAAGTAGCAGGGTTTTGTTGCCAAAACTAAGCAAGAAAGATAGAGATCAACCATATCAGATTTCTCATCATTTTGACTACTTCTAA 1530 0.4765 MATTKAIIARDESDYDSSSSSLTTLPESSRSWMTNLSFSSRRRSSSVSVCSSTTTDTTTSSLFLGSHAKKPHKANHAAWEAMSRLRRDSNGQLGLHHFRLLRRLGGGDIGNVYLCQIRNPLVVGSKQSLYAMKVVDREALSVRNKLQRAVMEKEILGMLDHPFLPTLYAEFEASHYSCLVMEFCPGGDLYASRQRQPGKRFSIQSTKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKSSFKTIPRSSSTSPACAAPMQSCFSSASFRSKSKRESRVTTIIRENVGVQKEQARKEDDDEEDDIDEDDDDQPELVAEPINAKSMSFVGTHEYLAPEVISGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNGKTLINILKQPLAFPRIAASSSKEYEEMVRVQDLISKLLVKNPKKRSGSCMGSVEIKRHGFFKGVNWALIRSIKPPEVPADMNKIRSSRVLLPKLSKKDRDQPYQISHHFDYF 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0805 509 PANTHER FLIPPASE KINASE 1-RELATED 29 479 - -
Lele17g0805 509 Pfam Protein kinase domain 99 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0805 509 Pfam Protein kinase domain 348 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0805 509 SMART serkin_6 98 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0805 509 ProSiteProfiles Protein kinase domain profile. 98 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0805 509 MobiDBLite consensus disorder prediction 310 336 - -
Lele17g0805 509 CDD STKc_phototropin_like 96 476 - -
Lele17g0805 509 Gene3D Transferase(Phosphotransferase) domain 1 346 476 - -
Lele17g0805 509 MobiDBLite consensus disorder prediction 321 336 - -
Lele17g0805 509 FunFam protein kinase PINOID 2 96 183 - -
Lele17g0805 509 Gene3D Phosphorylase Kinase; domain 1 96 183 - -
Lele17g0805 509 SUPERFAMILY Protein kinase-like (PK-like) 82 478 IPR011009 -
Lele17g0805 509 FunFam protein kinase PINOID 184 252 - -
Lele17g0805 509 Gene3D Transferase(Phosphotransferase) domain 1 184 253 - -
Lele17g0805 509 FunFam serine/threonine-protein kinase D6PK-like 346 476 - -
Lele17g0805 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0805 Lele-ChrLele17 19542742 19544403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0805 1 509 AGC Kinase Gene Family AT2G26700 56.514 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele17g0805 Pkinase 2e-31 CL0016