Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0796 ATGCTGAGCAGAGACAACAGCTCGTGTGCATTTCCTCTCGTCTTCGCAAGGAAAAACCCTAGCCTCTTTTCTCTCGTGAAATCAGCGACGCAACCAATAATGACTGGAGAGGCTGTGAATCCTAAAGCTTACCCTTTGGCGGATGCCCAACTCACAATAACAATACTGGATCTTGTCCAGCAAGCTGCCAATTACAAGCAGCTCAAGAAGGGTGCTAATGAAGCAACCAAAACGCTGAACAGGGGTATTGCTGAGTTCATAGTGATGGCGGCAGACACTGAGCCACTCGAGATTCTTCTCCATCTTCCTCTACTTGCTGAGGATAAGAATGTTCCTTATGTGTTTGTTCCATCAAAACAAGCACTTGGACGAGCATGTGGAGTTACACGGCCAGTGATAGCATGTTCTGTGACAAGTAACGAGGGAAGTCAATTGAAATCCCAGATACAACAGCTAAAGGATGCTATTGAGAAGCTTTTGATCTGA 486 0.4588 MLSRDNSSCAFPLVFARKNPSLFSLVKSATQPIMTGEAVNPKAYPLADAQLTITILDLVQQAANYKQLKKGANEATKTLNRGIAEFIVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLKDAIEKLLI 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0796 161 PRINTS Ribosomal protein L7A/RS6 family signature 68 82 IPR018492 -
Lele17g0796 161 PRINTS Ribosomal protein L7A/RS6 family signature 87 100 IPR018492 -
Lele17g0796 161 PRINTS Ribosomal protein L7A/RS6 family signature 103 113 IPR018492 -
Lele17g0796 161 PRINTS Ribosomal protein L7A/RS6 family signature 113 127 IPR018492 -
Lele17g0796 161 SUPERFAMILY L30e-like 39 159 IPR029064 -
Lele17g0796 161 ProSitePatterns Ribosomal protein L7Ae signature. 106 123 IPR004037 GO:0042254|GO:1990904
Lele17g0796 161 Gene3D - 32 161 IPR029064 -
Lele17g0796 161 FunFam NHP2-like protein 1 homolog 34 161 - -
Lele17g0796 161 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 56 144 IPR004038 -
Lele17g0796 161 PRINTS High mobility group-like nuclear protein signature 115 127 IPR002415 GO:0003723|GO:0005730
Lele17g0796 161 PRINTS High mobility group-like nuclear protein signature 41 54 IPR002415 GO:0003723|GO:0005730
Lele17g0796 161 PRINTS High mobility group-like nuclear protein signature 71 81 IPR002415 GO:0003723|GO:0005730
Lele17g0796 161 PRINTS High mobility group-like nuclear protein signature 54 69 IPR002415 GO:0003723|GO:0005730
Lele17g0796 161 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 35 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0796 Lele-ChrLele17 19480627 19482541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0796 68 123 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 35.714 4.15e-06 43.5