Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0785 ATGTCGTCGAATCAAACTAGTGTTGGTGAAGTTGGTAGTGAAGCAATTCGACTTGTGTTTTTGGATAGTAGAGGTGAAGAGACAACAATATTACTAGCTTATGATGATTCAGACCCTGAATTTGTAGACATGGACGACGATGAGGTTGAAGAAGCTGCAGGAATGGCGAATTCTGCAACTCAAAAGTCAATAGAAAGTTTAGAAAAAGTTAGAATTGAAGAGCCTGCATTCTGCTCCATATGTTTCGACGAGATTCCATCAAATAAAAAACAAGATGAAGAAGAGAAAGAAGCAGCAGTTCGAATTCCTACACCTTGTGGTCATGTTTATCACCTTAATTGCATTCTCAAGTGGTTCAACAAGCAGAATACTTGTCCTTTGTGTCGCTGCAAGATTCCAAGCTAAGCAGCAGCAGCAAGCACTTCCCTTGTAGCTCAAAGGACAAAACTTCAATATCGACGTCTTTCTTTCTTATTAAAAGCTGATCAGATTCTTCTACCTCTGCCATCATATGCTCCTCCTCCTCCTCCTCCTCCTTTTTATGGAGTAATGGGTTCACCAGAAACACACCCTAATGGGCTAAACATGAAGAAGAAGAAGGAGACCAATTCAGGAATCATTCAGATTCTCATCATAATCTCTCTCACACTACTAGTCTTTGGTTCTGCACAAGAAGAAGTGAGGGAGAAGAAGAAAGTGGTATTGGGGTCAAGGCCACCAGGGTGTTGGAACGAGTGCTTTGGGTGCAAACCTTGCAGGGCTGCCTTGGTGATCTCTTCACGCCACAGATCATCAGACATGGCAGCATCAGCTGGTCGGAGAGATCAGGAAGGATACTATCTTCTCTCATGGGAATGCAAATGCGGTAACAAGCTCTTTGACCCTTAG 888 0.4291 MSSNQTSVGEVGSEAIRLVFLDSRGEETTILLAYDDSDPEFVDMDDDEVEEAAGMANSATQKSIESLEKVRIEEPAFCSICFDEIPSNKKQDEEEKEAAVRIPTPCGHVYHLNCILKWFNKQNTCPLCRCKIPSXAAAASTSLVAQRTKLQYRRLSFLLKADQILLPLPSYAPPPPPPPFYGVMGSPETHPNGLNMKKKKETNSGIIQILIIISLTLLVFGSAQEEVREKKKVVLGSRPPGCWNECFGCKPCRAALVISSRHRSSDMAASAGRRDQEGYYLLSWECKCGNKLFDP 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0785 295 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 50 133 - -
Lele17g0785 295 SUPERFAMILY RING/U-box 67 135 - -
Lele17g0785 295 MobiDBLite consensus disorder prediction 177 197 - -
Lele17g0785 295 Pfam RING-H2 zinc finger domain 78 129 IPR024766 GO:0008270
Lele17g0785 295 ProSiteProfiles Zinc finger RING-type profile. 78 129 IPR001841 -
Lele17g0785 295 SMART ring_2 78 128 IPR001841 -
Lele17g0785 295 Pfam Epidermal patterning factor proteins 234 295 - -
Lele17g0785 295 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 45 135 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0785 Lele-ChrLele17 19398333 19399966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0785 73 147 Rapid Response to Elicitors AT3G16720 34.667 2.25e-09 55.5