Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0782 ATGTCGAGCTGCAGCAACGATGTTGCCCCTGAGCAACTCTGCTACATCCCTTGCAACTTTTGCAACATTGTTCTTGCGGTGAGTGTTCCATGCAGTAGCTTATTTGACATAGTGACCGTTCGATGTGGACACTGCAGCAATCTATGGTCAGTGAACATGGCTGCTGCGTTTCAGTCACTGTCATGGCAAGATGTTCAGGTTACTCACATTTCTAACCAATTAGTTTCAGCTTATTTTCAGGGGGCTCTTTCAGCGTCTGGTGTATACAACAATCCGGAGTACAGAATTGACACATCAGGTTCCTCTTCCAAATGCAATAATAATATGATTGCAATGCGTGCACCCGCCAATCATGTCACTAAGGAAAGAATTGTCAACCGCCCTCCCGAGAAGAGGCAGCGCGTACCTTCCGCATATAATCAGTTCATAAAGGAAGAGATTCAGAGGATCAAGGCTAATAATCCAGATATCAGTCACAGGGAAGCATTCAGTACAGCTGCCAAGAACTGGGCACACTTCCCTCATATTCATTTTGGGCTGATGTTGGAGACTAATAATAATCAAGCTAAGATGGAGAATGGGACGTCTGAGAAGCATTTAATGACGAAGTCGGCACTTTTGAACAAATGA 630 0.446 MSSCSNDVAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCSNLWSVNMAAAFQSLSWQDVQVTHISNQLVSAYFQGALSASGVYNNPEYRIDTSGSSSKCNNNMIAMRAPANHVTKERIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNNQAKMENGTSEKHLMTKSALLNK 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0782 209 Gene3D High mobility group box domain 117 175 IPR036910 -
Lele17g0782 209 SUPERFAMILY HMG-box 123 173 IPR036910 -
Lele17g0782 209 PANTHER PROTEIN YABBY 6-RELATED 1 191 IPR006780 GO:0007275
Lele17g0782 209 FunFam axial regulator YABBY 5-like 118 176 - -
Lele17g0782 209 Pfam YABBY protein 9 180 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0782 Lele-ChrLele17 19376918 19380810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0782 8 191 C2C2-YABBY Transcription Factor Family AT2G26580 68.478 2.36e-83 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele17g0782 YABBY 3.8e-71 CL0114