Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0769 ATGGATCCAAGGCCCAAGAAGAGGTCAATTCTTTGTGGCCTCGGTCTTTTCAAGTCATCCAAATTCTATCTCTCTTTCAGATTTGGAAAGAAGGAACCAGAAGCCTTATATCAGCCTTATAATGCTATATATGCAAAATAAATTTCACTTTCTTTCTCACAGCTTCAGAAAATTCTAAGTAACCTCATGGAAAGCAAAGGATTGGCACTGAAGCCACATCCCAAAAAGAATCTATGGAAGCCTGAGGAAGACTTGGTTCTGAAAACCTACATTGAAGCTCACGGTGAAGGAAACTGGGAAACAGTTTCCAAAAATTCAGGTCTAAACAGAGGAGGGAAGAGTTGCAGGCTAAGATGGAAGAACTATTTGAGACCTGACATTAAACGCGGAGAAATGTCTGAAGAAGAAGAAGACCTTATCATCAGACTGCATAAGCTTCTTGGCAACCGATGGTCACTAATAGCTGGAAGAATTCCTGGTAGAACCGATAACGAAGTGAAGAATTACTGGAATACCCATTTGAACAAGAGATGCCCTCGAGGCAAAAGGAAAGCAATCGATTCAAACAACAATCACCAAGAAACCAGCAAGAAATCACGAATGGGCAACTCCGACTTACCGATTTCCGCAAGTATAGCAGAGACAGGGTTGTTGGATGCGAGGAAAGAAGAGAACTGTAACATCACAAACTCTTGGATCGACGAAATGCAGAGCTTCAACTGTGACCTAGATTTTCCGATTGTGCCTGGGAACAGTCCGGTATTTGATTTCGACGATGAGGCTGCTTTCATGACGGATTTAAATTCCATTGTCCTGTTTGAAACTGAAGCTTTAGACTATGGATGGTTGGAGTCCAATTCGCACAAGCAATGCTTCCTGCTGTAA 885 0.4215 MDPRPKKRSILCGLGLFKSSKFYLSFRFGKKEPEALYQPYNAIYAKXISLSFSQLQKILSNLMESKGLALKPHPKKNLWKPEEDLVLKTYIEAHGEGNWETVSKNSGLNRGGKSCRLRWKNYLRPDIKRGEMSEEEEDLIIRLHKLLGNRWSLIAGRIPGRTDNEVKNYWNTHLNKRCPRGKRKAIDSNNNHQETSKKSRMGNSDLPISASIAETGLLDARKEENCNITNSWIDEMQSFNCDLDFPIVPGNSPVFDFDDEAAFMTDLNSIVLFETEALDYGWLESNSHKQCFLL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0769 294 FunFam MYB-related transcription factor 75 128 - -
Lele17g0769 294 SUPERFAMILY Homeodomain-like 75 170 IPR009057 -
Lele17g0769 294 MobiDBLite consensus disorder prediction 181 205 - -
Lele17g0769 294 Gene3D - 131 204 - -
Lele17g0769 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 124 178 IPR017930 -
Lele17g0769 294 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 71 200 - -
Lele17g0769 294 FunFam Transcription factor TT2 132 202 - -
Lele17g0769 294 Pfam Myb-like DNA-binding domain 77 123 IPR001005 -
Lele17g0769 294 Pfam Myb-like DNA-binding domain 129 174 IPR001005 -
Lele17g0769 294 ProSiteProfiles Myb-like domain profile. 71 123 IPR001005 -
Lele17g0769 294 SMART sant 128 176 IPR001005 -
Lele17g0769 294 SMART sant 75 125 IPR001005 -
Lele17g0769 294 Gene3D - 76 128 - -
Lele17g0769 294 CDD SANT 131 174 IPR001005 -
Lele17g0769 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 123 IPR017930 -
Lele17g0769 294 CDD SANT 79 123 IPR001005 -
Lele17g0769 294 ProSiteProfiles Myb-like domain profile. 124 174 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0769 Lele-ChrLele17 19283791 19288056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0769 63 256 MYB Transcription Factor Family AT5G52600 51.244 1.06e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele17g0769 Myb_DNA-binding 1.1e-11 CL0123