Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0727 ATGGCGGATCTGAAAGGAGGGACTCGACCGCCATGGGTGGGGCTTGGAGCTGGTGTGTGGTTTCAAGTAGCTTCTGGAAACTCCTACGGCTTCCCTCTCTACTCTCACGCTCTCAGATCCGTTCTGGGATATAACCAGCGCCAGATTGCCATGCTCGGTGTCGCCAACGACATTGGTGAGAACGTTGGCGTTCTTCCTGGTCTCGCCTCCAACAAGTTCCCTCCTTGGCTCATTCTCTCCGTTGGTGCTCTTCTCTCTTTTCTTGGCTATGGCGTTCTCTGGCTCTCTGTTAGTCGCACTATTCCCTCTCTTCCTTACTGGTTGTTATGGATTGCTTCAGTTGTTGCCACCAACGGTAGTACATGGTTAAGCACACCTGTTCTTGTCACCAACATGAGAAATTTCCCTGCGAGCAGAGGCACAGTCGCCGGAGTCCTCAAAGGTTATCTAGGCTTAAGTGCTACGGTTTTCACTGAAGTTTACAGCCTAGTCCTTCACAAGTCTTCCCCCAACTTCCTCTTGTTCCTTGCCCTTGGCATTCCTATTACAAGTTTTGCCTTGATGTTTCTTGTCAGGCCCTGCACTCCTGCTTCTGGTGAAGACCCCTCAGAAAATAACCATTTTTCCTTCATCCAAGCCTCTAGCATCATTCTAGGTTCATACCTTCTTGCAACCACAGTAATTGGGGATTTTGTATCGTTTAGTGGTGTAGCATCCTATGCTTCGGTCTTTCTGATGATCCTCCTGTTAATGGCTCCTCTTGCTGTCCCTATAAAGATGACATTATTTCCCCGAAAAGCAATCAAACCAGAGGAACCTGAGGTACAAGTAGGATCTTCGGAGCGTGATGAGAAATCAGAACCTTTGTTGCTTCCAGTATCTTCATCGTCAGGAGCACTTGAGAGTTTTTATGACAATGATGAGTCATCTGAGGTGGCTATGCTTCTTGCTGTTGGTGAAGGGGCAGTGCATAAGAAGAAAAGGAGGCCTAAAAGAGGGGAAGATTTTACGTTTCGTGAGGCAGTGTTTAAAGCTGATTTTTGGCTTCTGTTTCTGGTTTTCTTTGTTGGTGTAGGAACTGGGGTTACCGTGGTAAATAACCTAGCACAGATTGGGATCGCACAAGGTGTGGAAAATACCACAATTTTGTTGGCCTCTTTTGGCTTCTGCAATTTCTTGGGTCGGCTTGGTGGAGGCGTTGTTTCTGAACATTTTGTCAGAACAAGAACAATCCCAAGAACAGTGTGGATGACATGCACACAGATAATAATGATCATCTCGTACCTGTTGTTTGCATATACTGTGAGTGGAACTCTTTATCCTGCAATAGCATTTCTTGGAATCTGCTACGGCGTGCAGTTTTCTGTTACGATTCCTACTGTTTCTGAGATATTTGGCCTGAAACACTTCGGCGTTATCTACAACTTCATGTGCATGGGAAACCCTCTCGGCGCCTTCCTTTTCTCCGCCCTCTTAGCCGGCCATGTCTACGACGCCGAAGCAGCCAAGCAGCATGGTTTGAGCCACCTGGTTCATGACTCTATAACTAAGGCCTGTGTAGGAGCCTCTTGCTTTCAGCTGACCTTTTTGGTTTTGGCTGGTGTCTCTGCTGTAGGGACCCTCTTGAGCATTATTTTGACTACGAGAGTGAAGCCTGTTTATCAGATGCTTTATGCTGGTGGTTCTTTTAGGCTTCCCCAATCCTCTTCAAGCCATTGA 1719 0.4706 MADLKGGTRPPWVGLGAGVWFQVASGNSYGFPLYSHALRSVLGYNQRQIAMLGVANDIGENVGVLPGLASNKFPPWLILSVGALLSFLGYGVLWLSVSRTIPSLPYWLLWIASVVATNGSTWLSTPVLVTNMRNFPASRGTVAGVLKGYLGLSATVFTEVYSLVLHKSSPNFLLFLALGIPITSFALMFLVRPCTPASGEDPSENNHFSFIQASSIILGSYLLATTVIGDFVSFSGVASYASVFLMILLLMAPLAVPIKMTLFPRKAIKPEEPEVQVGSSERDEKSEPLLLPVSSSSGALESFYDNDESSEVAMLLAVGEGAVHKKKRRPKRGEDFTFREAVFKADFWLLFLVFFVGVGTGVTVVNNLAQIGIAQGVENTTILLASFGFCNFLGRLGGGVVSEHFVRTRTIPRTVWMTCTQIIMIISYLLFAYTVSGTLYPAIAFLGICYGVQFSVTIPTVSEIFGLKHFGVIYNFMCMGNPLGAFLFSALLAGHVYDAEAAKQHGLSHLVHDSITKACVGASCFQLTFLVLAGVSAVGTLLSIILTTRVKPVYQMLYAGGSFRLPQSSSSH 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0727 572 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 555 - -
Lele17g0727 572 CDD MFS_Mch1p_like 10 540 - -
Lele17g0727 572 SUPERFAMILY MFS general substrate transporter 13 195 IPR036259 -
Lele17g0727 572 Gene3D MFS general substrate transporter like domains 201 550 IPR036259 -
Lele17g0727 572 SUPERFAMILY MFS general substrate transporter 220 551 IPR036259 -
Lele17g0727 572 Pfam Nodulin-like 11 258 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0727 Lele-ChrLele17 18981437 18984131 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0727 5 572 Nodulin-like Gene Family AT1G80530 53.873 0.0 630
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0727 17 18981437 18984131 Lele19g0832 19 5019703 5022183 hybridization
Lele17g0727 17 18981437 18984131 Lele20g0626 20 13534896 13537060 hybridization