Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0718 ATGGCTGATAATATCTTAGTTTCTGAAATTAAGATTATGTGCTTGTCCAGTTATCGCCTCAAGAATGATATGACTTTGTCCATATGTAGGCAATCTTTAGGAAGTTTATGTTCCTTGATTGTGATGTCATCTTGTACAATACCGGGCATTGGATCTGAGCTTCTCATAATTTTCTTTGAAAGCAATGGAATGTATCATTATGCTCTATCACTTGAGTTTTCTGGCTCCAAGAAATCTGGCAAGGGAAAGAGGCCTGGAAAAGGTGGGAATCGTTTCTGGAAATCCATTGGATTGGGATTCAAGACTCCCAGGGAGGCCATTGAAGTACTACATGGAACCTATATTGATAAGAAGTGCCCCTTCACTGGTACTGTTTCTATCCGAGGTCGTATCTTAGCTGGCACTTGTCACAGTGCAAAGATGACAAGGACCATTATTGTTAGGAGGAATTATCTTCATTTTGTCAAGAAGTATCAGAGATATGAGAAAAGGCATTCAAATATTGCTGCTCATATATCACCTTGCTTTCGTGTGAAGGAAGGGGATCATCTGCTTTTGGGTATGGAGATTGGAGAAGGGTCTTCTCTGTTGGGAAGAACAATTTGGTTGCCAGGATTTGGAAAAAGGGCGTTTGTGGGTTGCCGAAAAGTTACAAGTGGTCATTTTGTTTTTAATGGGAAGATCCGGCCGCTCTCAAAGACGGTGAGGTTCAATGTGTTGAAGGTGATCCCTGCTGGATCTTCTGGTGGTGTGAAAAAGGCATTCACTGGTGCTTAA 777 0.4157 MADNILVSEIKIMCLSSYRLKNDMTLSICRQSLGSLCSLIVMSSCTIPGIGSELLIIFFESNGMYHYALSLEFSGSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAIEVLHGTYIDKKCPFTGTVSIRGRILAGTCHSAKMTRTIIVRRNYLHFVKKYQRYEKRHSNIAAHISPCFRVKEGDHLLLGMEIGEGSSLLGRTIWLPGFGKRAFVGCRKVTSGHFVFNGKIRPLSKTVRFNVLKVIPAGSSGGVKKAFTGA 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0718 258 FunFam 40S ribosomal protein S11 70 196 - -
Lele17g0718 258 Gene3D - 209 257 - -
Lele17g0718 258 Gene3D - 69 192 - -
Lele17g0718 258 SUPERFAMILY Nucleic acid-binding proteins 128 186 IPR012340 -
Lele17g0718 258 Pfam Ribosomal protein S17 134 183 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele17g0718 258 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 81 248 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele17g0718 258 Pfam Ribosomal_S17 N-terminal 75 132 IPR032440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0718 Lele-ChrLele17 18905240 18908795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0718 90 257 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 65.476 2.98e-70 211