Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0717 ATGTGTTTACAGGACGCCGAGCAAGTTGGCGCCGATATGGAGAACCCAGATGATAGAAGAAGGTCTTGGCCTTTGCATTGTGACCTCTTGCATACCCACATGGAAGAAGAACCTCCTTTTAGAACTTCCGGCGATCGGAGTTTCAGTGTTGTGAATTCATTTCCGCTGGATAGCATAAGTGAAGACACAGTGATTGCGGACAAAAAACAGAACCAGATGAACTTTGTCCCTGCTCTGCGATCTGGCGAGTGGTCAGATATCGGTGGTCGCCCTTATATGGAAGATACTCACATCTGCATTGGAGACTTAGGAAAGAAGTTTGGTTATGATGAACTCAGTGAGGAAGTTATTTCCTTTTATGGGGTATTTGATGGACACGGAGGGAAGAGCGCTGCGGTATTCGTCCGTGATCATCTTCCAAGAGTTATTATTGAGGATGCTGATTTTCCTGTGGAGCTAGAGAAGGTGGTCACAAGGTCATTTTTACAGACAGATGCTGCATTTGCAGAGACATGTTCCCTTGAGTCTTCTGGTACAACTGCATTAACTGCCATTATTTTTGGGAGATCTTTGCTAGTGGCCAATGCTGGGGACTGCAGGGCTGTTTTGTCCAGACGTGGAAGGGCGATGGAAATGTCCAAAGACCATAGGCCCTTCTGCTTGAAAGAGAGGAAGCGAATCGAGTCTCTGGGTGGATTCGTTGATGACGGTTATCTGAATGGTCAGTTAGGTGTCACACGGGCGCTAGGCAACTGGCATCTTGAGGGCTTGAAGGAAATGAGTGAAAGAGGAGGACCTTTAAGTGCTGAACCAGAACTTAAACTGACCACACTGACCAAAGAAGATGAGTTTTTGATAATTGGAAGTGATGGGATTTGGGATGTTTTCAGCAGCCAAAATGCTGTAGATTTTGCAAGAAGGAGGCTTCAAGAACATAACGATGTGAAACTATGCTGCAAGGAGATGGTGGAGGAAGCCATAAAGAGAGACTCAACAGATAACTTAACTGTTGTGATGGTGTGTTTTCACTCAGAACCACCGCCACCTGTGGTGGTAGAGAGGCCAAGATTCAGAAGAAGCATATCTGCTGAGGGACTTCAGAATCTCAAGTCCTCCCTGGAAGGATAG 1128 0.4619 MCLQDAEQVGADMENPDDRRRSWPLHCDLLHTHMEEEPPFRTSGDRSFSVVNSFPLDSISEDTVIADKKQNQMNFVPALRSGEWSDIGGRPYMEDTHICIGDLGKKFGYDELSEEVISFYGVFDGHGGKSAAVFVRDHLPRVIIEDADFPVELEKVVTRSFLQTDAAFAETCSLESSGTTALTAIIFGRSLLVANAGDCRAVLSRRGRAMEMSKDHRPFCLKERKRIESLGGFVDDGYLNGQLGVTRALGNWHLEGLKEMSERGGPLSAEPELKLTTLTKEDEFLIIGSDGIWDVFSSQNAVDFARRRLQEHNDVKLCCKEMVEEAIKRDSTDNLTVVMVCFHSEPPPPVVVERPRFRRSISAEGLQNLKSSLEG 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0717 375 FunFam Probable protein phosphatase 2C 22 64 345 - -
Lele17g0717 375 ProSitePatterns PPM-type phosphatase domain signature. 119 127 IPR000222 GO:0043169
Lele17g0717 375 Gene3D - 60 346 IPR036457 -
Lele17g0717 375 SUPERFAMILY PP2C-like 73 344 IPR036457 -
Lele17g0717 375 PANTHER PROTEIN PHOSPHATASE 2C 67 340 IPR015655 GO:0004722|GO:0006470
Lele17g0717 375 SMART PP2C_4 70 340 IPR001932 -
Lele17g0717 375 CDD PP2Cc 80 342 IPR001932 -
Lele17g0717 375 Pfam Protein phosphatase 2C 92 334 IPR001932 -
Lele17g0717 375 ProSiteProfiles PPM-type phosphatase domain profile. 80 342 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0717 Lele-ChrLele17 18896106 18899137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0717 69 375 PP2C-type Phosphatase Gene Family AT2G25620 61.218 3.42e-136 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Lele17g0717 PP2C 1.9e-65 CL0238