Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0700 ATGTCGGGCTGGGATGAGGGAGCCGTCTACTATAGCGACCAAGCTCACTCCTGGGACGACCGCGGCGGAGACGCTCCCACCTCGGCAGCCGACAATCACACGATCCTCCAGAAATTAAAGGAGTTCATACGAAACTTCGAGACCGCCAAGAATGTGTTCCCTTACAGAGAAAGCCTTGTCCATAATCCTAAGTTTCTGGTTGTCGACTTGGAAGATCTTGATGCCTTTGATTCTGACCTGCCTGCCAAACTCCGCTCCAACCCGGCTGATTACCTTCCACTGGTTTTGGTTAGTTTGAAGACGAAAGTGGCCGGGGATACTGGGGTTATGGAAGACCCGGTGACTGGGGATGTGCAGATTTTGCTCACTTCCAAGGAAGATCCAGTGTCAATGAGATCCCTTGGGGCTCAATATATATCAAAGCTGGTTAAGATTGCGGGGATTACAATTGCTGCATCGAGGACTAAGGCGAAGGCAACTTATGTCACCTTAATATGTAAGAATTGTAAAAAGGGGAAGCAAGTTCCATGTCGGCCAGGACTTGGTGGGGCGATTGTCCCTCGTTCATGTGATCATATTCCTCAGCCAGGAGAAGAACCATGCCCAGTTGATCCATGGCTTGTGGTTCCTGATAAGAGCAAGTATGTTGACCAACAAACCTTAAAACTACAAGAAAACCCCGAGGATGTCCCAACTGGGGAGCTTCCCAGAAACGTGCTTCTCTCTGTTGATCGTCATCTCGTTCAAACAGTGGTACCTGGCTCAAGATTGACAATCATAGGAATCTATAGTATCTATCAAACTTCCAATTCTTCTGCAGCCCAAAAAGGAGCCGTTGCAGTTAGACAGCCTTACATTAGGGTTGTTGGAATGGAACAAGCAAATGAGGCCAGCTCTCGAGGTCCAGCGGCATTCACACAAGAGGAGATAGAAGAATTCAAAAAATTTGCTGCTGAACCTGATGCATACAAAAATATATGCGCCAAGATTGCTCCCTCCATATTTGGTCATGATGATGTTAAAAAGGCGGTGGCTTGTCTTCTCTTTGGAGGGTCGAGAAAGAACTTACCTGATGGAGTGAAGTTAAGAGGTGATATCAACGTATTACTCCTTGGGGATCCATCAACCGCAAAGTCACAGTTTCTCAAGTTTGTTGAAAAGACTGCTCCTGTTGCTGTTTATACTTCGGGAAAAGGATCATCAGCCGCAGGTCTCACAGCTTCTGTAATTCGAGATAGCAGCTCTCGAGAGTTCTACCTTGAAGGAGGTGCCATGGTCTTGGCAGATGGAGGTGTTGTCTGCATTGATGAGTTTGACAAGATGAGACCAGAGGATAGGGTTGCCATTCATGAAGCCATGGAACAGCAAACTATATCCATAGCGAAAGCAGGAATAACAACTGTTCTTAATTCAAGAACTTCTGTGCTTGCTGCCGCCAACCCTCCATCAGGACGTTATGATGATCTTAAGACTGCACAGGATAACATTGATCTGCAAACAACCATTCTTTCTAGGTTCGATTTAATCTTCATTGTGAAAGACATCAGAATGTATAGTCAAGACAAGATCATAGCTAGCCATATCATTAAGGTTCATGCATCAGCTAATACAACTACTGGTGAGAGTAGGGTTTCTAAAGACAACTGGCTCAAGAGGTATTTACAATATTGCCGCACTGAATGTCACCCTCGTCTGTCAGAATCTGCAGCAACATTACTACAGAACAATTATGTCAAAATCAGACAGGATATGAGGAGGCAGGCAAATGAAACTGGCGAAGCTGCTGCAATACCAATTACTGTAAGGCAGCTAGAAGCTATTGTTAGACTGAGTGAGGCTCTTGCAAAAATGAAGCTATCTCATATTGCAACCGAGGAGAATGTGCAAGAGGCAATAAGGCTTTTTACCGTTTCTACAATGGATGCAGCTAAGTCTGGAATATCCCTACAAGTAAATCTTACACCAGAAATGGCAAATGAAATAAAGCAAGCAGAAACCCAGATAAAGAGAAGAATTGGGATTGGAAACCATTTGTCAGAAAGAAGGTTGATTGATGATCTCGTTAGAATGGGATTGAATGACTCTATTGTGAGAAGAGCTCTAATAATCATGCACCAGAGAGACGAAATAGAGTACAAGAGAGAAAGGCGTCTTATATTCAGGAAAGCATAA 2172 0.4443 MSGWDEGAVYYSDQAHSWDDRGGDAPTSAADNHTILQKLKEFIRNFETAKNVFPYRESLVHNPKFLVVDLEDLDAFDSDLPAKLRSNPADYLPLVLVSLKTKVAGDTGVMEDPVTGDVQILLTSKEDPVSMRSLGAQYISKLVKIAGITIAASRTKAKATYVTLICKNCKKGKQVPCRPGLGGAIVPRSCDHIPQPGEEPCPVDPWLVVPDKSKYVDQQTLKLQENPEDVPTGELPRNVLLSVDRHLVQTVVPGSRLTIIGIYSIYQTSNSSAAQKGAVAVRQPYIRVVGMEQANEASSRGPAAFTQEEIEEFKKFAAEPDAYKNICAKIAPSIFGHDDVKKAVACLLFGGSRKNLPDGVKLRGDINVLLLGDPSTAKSQFLKFVEKTAPVAVYTSGKGSSAAGLTASVIRDSSSREFYLEGGAMVLADGGVVCIDEFDKMRPEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRYDDLKTAQDNIDLQTTILSRFDLIFIVKDIRMYSQDKIIASHIIKVHASANTTTGESRVSKDNWLKRYLQYCRTECHPRLSESAATLLQNNYVKIRQDMRRQANETGEAAAIPITVRQLEAIVRLSEALAKMKLSHIATEENVQEAIRLFTVSTMDAAKSGISLQVNLTPEMANEIKQAETQIKRRIGIGNHLSERRLIDDLVRMGLNDSIVRRALIIMHQRDEIEYKRERRLIFRKA 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0700 723 FunFam DNA helicase 30 111 - -
Lele17g0700 723 ProSiteProfiles MCM family domain profile. 322 528 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele17g0700 723 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 332 639 IPR027417 -
Lele17g0700 723 CDD MCM5 325 638 - -
Lele17g0700 723 Pfam MCM P-loop domain 310 532 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele17g0700 723 SMART mcm 127 640 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lele17g0700 723 Gene3D - 30 111 - -
Lele17g0700 723 Pfam MCM OB domain 131 266 IPR033762 -
Lele17g0700 723 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 557 572 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Lele17g0700 723 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 282 294 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Lele17g0700 723 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 158 170 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Lele17g0700 723 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 132 147 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Lele17g0700 723 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 633 650 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Lele17g0700 723 Pfam MCM N-terminal domain 38 100 IPR027925 -
Lele17g0700 723 SUPERFAMILY Nucleic acid-binding proteins 39 288 IPR012340 -
Lele17g0700 723 Pfam MCM AAA-lid domain 549 638 IPR041562 -
Lele17g0700 723 Gene3D - 158 216 - -
Lele17g0700 723 Gene3D - 131 266 IPR012340 -
Lele17g0700 723 Gene3D - 303 657 IPR027417 -
Lele17g0700 723 FunFam DNA helicase 158 216 - -
Lele17g0700 723 FunFam DNA helicase 303 653 - -
Lele17g0700 723 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 32 679 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lele17g0700 723 ProSitePatterns MCM family signature. 431 439 IPR018525 GO:0003677|GO:0005524|GO:0006260
Lele17g0700 723 PRINTS Mini-chromosome maintenance (MCM) protein family signature 475 487 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele17g0700 723 PRINTS Mini-chromosome maintenance (MCM) protein family signature 502 510 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele17g0700 723 PRINTS Mini-chromosome maintenance (MCM) protein family signature 451 464 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele17g0700 723 PRINTS Mini-chromosome maintenance (MCM) protein family signature 363 378 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele17g0700 723 PRINTS Mini-chromosome maintenance (MCM) protein family signature 423 437 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0700 Lele-ChrLele17 18799873 18805333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0700 1 723 Core DNA Replication Machinery Family AT2G07690 78.659 0.0 1177