Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0681 ATGGCAGGGACTGGAGTTTTTGCAGAGATTTTTTATGGAGAAATGTACAAGTATTACGCTGATGGAGAATGGAAGAAGTCTTCTTCTGGGAAAAGCGTTCCTATTATTAATCCCACTACCAGAAAGACTCAGTACAAAGTTCAGGCTTGTACACAAGAAGAGGTCAATAAGGTGATGGATTTAGCAAAATCTGCACAGAAGTCATGGGCAAAGACGCCACTATGGAAGCGAGCTGAGCTTCTTCACAAGGCAGCAGCCATTCTTAAAGAACACAAAACTTCAATTGCAGAGGTCTTATCTGGGGATCTGGTTTCTTACTGTGCTGAAGAAGGTGTAAGGATTCTGGGAGAGGGCAAGTTCTTGGTATCAGATAGTTTTCCTGGAAATGAAAGAACCAAGTATTGCCTCACATCCAAGATTCCATTGGGAGTAGTTTTAGCCATCCCACCATTTAATTATCCGGTAAATCTTGCTGTCTCAAAGATTACTCCTGCACTTATTGCTGGAAACTCCATCGTGCTCAAGCCTCCTACTCAGGGAGCGGTTTCTTGTCTGCATATGGTGCACTGCTTTCACTTGGCTGGTTTTCCCAAAGGCTTAATCAGCTGTGTCACTGGCAAAGGCTCTGAGATTGGTGATTTTCTTACAATGCACCCAGGAGTGAACTGTATAAGCTTCACTGGTGGAGATACCGGCATTTCAATTTCGAAGAAGGCAGGCATGATCCCTCTTCAAATGGAGTTGGGAGGAAAAGATGCCTGCATTGTACTTGAAGATGCTGACCTTGATTTGGTAGCTTCCAACATTATAAAAGGAGGCTTCTCATACAGTGGTCAGAGGTGCACTGCTGTCAAGGTTGTCCTAGTGATGGAATCTGTTGCTGATGCTTGGGTGGAGAAAGTTAAGGCCAAGGTGACCAAACTGACTGTGGAGCCACCGGAAAATAACTGTGATATCACTCCAGTGGTGACAGAGTCATCGGCAAACTACATTGAAGGTCTTGTAATGGATGCTAAAGAGAAAGGAGCAACATTCTGCCAAGAGTACAAGAGAGAAGGAAACCTTATTTGGCCATTGCTTCTAGATAATGTCTGGCCTGATATGAGAATCGCATGGGAGGAGCCATTTGGACCAGTCTTGCCCGTCATTAGAATCAATTCTGTTGAAGAAGGAATCCACCATTGCAATGCTAGCAATTTTGGACTTCAGGGTTGTGTCTTCACAAAGGATGTGAACAAAGCAATTTTGATCAGTGATGCAATGGAGACAGGAACGGGTATTAAGGACAGAGGAATTGGATCACAAGAGATTACAAACAGCATAAACATGATGACCAAGGTCAAGACCACTGTGATTAACTTGCCAACCCCTTCTTATACCATGGGCTAA 1389 0.4384 MAGTGVFAEIFYGEMYKYYADGEWKKSSSGKSVPIINPTTRKTQYKVQACTQEEVNKVMDLAKSAQKSWAKTPLWKRAELLHKAAAILKEHKTSIAEVLSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKITPALIAGNSIVLKPPTQGAVSCLHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGISISKKAGMIPLQMELGGKDACIVLEDADLDLVASNIIKGGFSYSGQRCTAVKVVLVMESVADAWVEKVKAKVTKLTVEPPENNCDITPVVTESSANYIEGLVMDAKEKGATFCQEYKREGNLIWPLLLDNVWPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDVNKAILISDAMETGTGIKDRGIGSQEITNSINMMTKVKTTVINLPTPSYTMG 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0681 462 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 22 264 - -
Lele17g0681 462 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 274 285 IPR016160 GO:0016491
Lele17g0681 462 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 251 425 IPR016163 GO:0016620
Lele17g0681 462 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 250 431 - -
Lele17g0681 462 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 33 248 IPR016162 GO:0016491
Lele17g0681 462 PANTHER ALDEHYDE DEHYDROGENASE 1 461 - -
Lele17g0681 462 Pfam Aldehyde dehydrogenase family 24 425 IPR015590 GO:0016491
Lele17g0681 462 SUPERFAMILY ALDH-like 12 453 IPR016161 GO:0016491
Lele17g0681 462 CDD ALDH_F11_NP-GAPDH 16 453 - -
Lele17g0681 462 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 246 253 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0681 Lele-ChrLele17 18679667 18683593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0681 1 462 Aldehyde Dehydrogenase Gene Family AT2G24270 84.274 0.0 850
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0681 17 18679667 18683593 Lele19g0873 19 5294639 5296984 hybridization
Lele17g0681 17 18679667 18683593 Lele20g0578 20 13253947 13258138 hybridization