Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0680 ATGAGGGTTAGGGCGCGGAGGGGTCAAGCGACGGACCCACACAGCATCGCTGAGAGGTTACGGAGGGAGAGAATTGCAGAGAGAATGAAGGCTCTGCAAGAACTGGTTCCCAATGCCAACAAGACGGACAAGGCTTCGATGCTGGATGAGATCATAGACTATGTCAAGTTCTTGCAGCTCCAAGTGAAGGTTCTGAGCATGAGCAGATTGGGCGGTGCTGCTGCTGTTGCTCCTCTTGTTGCTGAGGGAGGAGGTGACTGCATCCAAGCCGCCGCCGCTTGCAACTCCAACAACGGCAACCAAACGGCGTCGTCCTCCAACGACCCCCTCGACATGACGGAGCACCAGGTGGCTAAGCTCATGGAGGAAGACATGGGCTCCGCTATGCAGTACCTTCAGGGGAAAGGTCTCTGCCTCATGCCCATCTCCCTCGCCACCGCCATCTCCACCGCCACGTGTCCCTCCCGGAACCCCTTGGTCCCTGCCGCCGCCAACAACTACCAACATGCCGTGGCGTCCAACGGAAACGGAGGGGAAGGGCCGTCCTCTCCGAGCATGTCGGTGTTGACCGTCCAGTCTGCAACGGCGGTTAACGAAGGCGCCGCCTCCGTTTCGAAGCCGTGA 624 0.5946 MRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVAEGGGDCIQAAAACNSNNGNQTASSSNDPLDMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCPSRNPLVPAAANNYQHAVASNGNGGEGPSSPSMSVLTVQSATAVNEGAASVSKP 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0680 207 Gene3D - 4 66 IPR036638 GO:0046983
Lele17g0680 207 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 2 148 - -
Lele17g0680 207 FunFam Transcription factor bHLH66 6 71 - -
Lele17g0680 207 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 69 IPR036638 GO:0046983
Lele17g0680 207 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 58 IPR011598 GO:0046983
Lele17g0680 207 Pfam Helix-loop-helix DNA-binding domain 14 59 IPR011598 GO:0046983
Lele17g0680 207 SMART finulus 15 64 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0680 Lele-ChrLele17 18672147 18674289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0680 2 195 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 73.711 2.00e-96 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele17g0680 HLH 5.3e-10 No_clan