Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0678 ATGCTGACACCGAGCGATGTGGGTAGGTTGCATAGACTTGTCATCCCCAAGAAATATGCCTCCACATGTTTTCCCGAAATCTCTAGAAGAATGGAAGAATATGCAAAGGCCGGCATGCGTGCTGATCATGAGCAGTTAGATTTCTTCGACAGGACGATGACTTCATGGAAGTTCCAGTACTGCTCTTGGAAGAGCAGCCAGAGTTATGTGTTTGAAGAGAATCGGTTAAAGGTTAATGACGCTGTTGCCTTTTACTCACGTGAAGTCGAAAGAGAAGGAAAAATAGTGAACAAGTTCTTCATGATTGACCCTGAAAGAGGTGAAGGACCCTATGGTAGCAGCAGCAGATGCAGACCAGGGATTGAAGTAGCTAAGGAAAATAAACCAACTATTTACTTTTTACAATTGAGGTAA 414 0.4324 MLTPSDVGRLHRLVIPKKYASTCFPEISRRMEEYAKAGMRADHEQLDFFDRTMTSWKFQYCSWKSSQSYVFEENRLKVNDAVAFYSREVEREGKIVNKFFMIDPERGEGPYGSSSRCRPGIEVAKENKPTIYFLQLR 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0678 137 Gene3D - 1 108 IPR015300 -
Lele17g0678 137 SMART B3_2 1 103 IPR003340 GO:0003677
Lele17g0678 137 CDD B3_DNA 2 85 IPR003340 GO:0003677
Lele17g0678 137 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 2 107 IPR044800 GO:0003700
Lele17g0678 137 SUPERFAMILY DNA-binding pseudobarrel domain 2 88 IPR015300 -
Lele17g0678 137 Pfam B3 DNA binding domain 2 92 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0678 Lele-ChrLele17 18652214 18652627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0678 2 103 RAV Transcription Factor Family AT1G50680 44.828 1.39e-22 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele17g0678 B3 2.9e-11 CL0405