Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0672 ATGGGTTTTGGGTCATTTGGTTCCATTGTAGTTCTGACTTTTTTCTTTGAGCATTTGGCCTGCCGGCAACCAAATACTGATGATTTCTTTGTGTCTGTGTTCTTGAAGAACATGAGTTTATCATCATCGTCGTCATCGTCTTCATCTTCCTCAAAAGCCTTCAACTTCTCTGCTTCTGTTTGTTCATGGCCTGGTGTTTCCTGTGATGCAAATAAAGAACATGTTGTTGAATTGAAAGCTTCTGGCTCTTTGAAGATTCTTAACCTCTCCTCCAATCAGATATCAGGCTCACTTGCCAGCAACTATGGCAACTTTGGTCTCCTCGAAACCTTTGACATGTCCTGCAACGATTTTTCTGGGGAAATTCCTGAAGCTATTAGCTCCCTTGTGAGTTTAAGGATCCTTAAACTTGACAAAAACAAGTTTGAGCATAACATACCTTCTGGGATTCTACAGTGTCAGTCTCTAGTTTCTATTGATCTTTCACTAAATCAGCTTAATGGCACTCTTCCTGAAGGTTTTGGAGCTGCTTTTCCTAAACTTGAAAGCTTGAACCTTGCTGGGAATAATCTTCATGGTCATGATTCAGATTTTTCAGGGTTGAAATCCATTACCAGTATTAACATATCTGCAAATTCCTTTCAGGGTTCTTTTGTGGGTATGCTTCAGGAACAGTTGGAGGTAATTGACCTTAGCAGGAACCAGTTTGATAGTAAGATTTCTCAGGTAAAGTTCAAGTACGGTTGGTCTCATTTGGTTTATCTGGATTTGTCTGAGAATAGACTTAGTGGGGAAATTTTCCAGTATCTGAATGAATCCCAGAATCTTAAACACCTTAATCTGGCACACAATAGGTTTGCAAGTCAGAAATTTCCACAAATTGAAAAGCTCTCAAGGTTGGAATATATGAACTTGTCCAAAGCTAATCTGCATGGCCACATTCCTGCTGAAATATCACAGCTGAGTAATTTGAGTTTACTTGATGTTTCTTTAAATAATCTTATTGGGGGAATTCCATTTCAAAGAAGTGAAAACCTCCAAATTCTTGACCTTTCATACAACAATTTGAGTGGTGAAATCCCTCAAGCTGTGTTGGAGAAGCTCCCATCAATGGAGAAATATAACTTCTCGTATAATAACTTAACCTTCTGTTCTTTGGGAATCAACCCCAATATCCTCAAAACAGCATTCTATGGATCATCAGACAATTGCCCGATTGCTGCGAATCCGAAGCTTTTCAAAAGAACCGATGAGCAACGAAAGGGGATGAAACTAGCTCTGGCATTGACCCTCTCAATGGTCTGCTTACTTTCTGGCCTTTTATTTCTAGCATTTGGTTGCAGAAGGAAAACCAAATCATGGGCAATTAAGCAAACTTCCTACAAAGAAGAGCAGAACATTTCGGGTCCCTTCTCATTCCAGACTGATTCAACTACCTGGGTGGCTGATGTCAAGCAAGCAAACTCAGTCCCAGTAGTAATCTTTGAGAAGCCATTACTCAGCATTACATTTTCAGATCTCTTGTACTCAACTTCAAATTTCGATCGGGGCACCCTTTTTGCTGAAGGCAAATTTGGGCCTGTTTACCGAGGTTTTCTGCCTAGTGGCATTCATGTGGCAGTTAAAGTTTTGGTTGTTGGTTCTACATTGACAGAACAAGAAGCTGCTAAAGAGCTCGAGTATCTTGGTCGAATCAAGCACCCTAATCTTGTTCCCCTAACTGGATATTGCTTTGCTGGGGATCAAAGGATTGCCATATATGATTACATGGAGAATGGGAACTTGCAAAACTTTCTTCATGACTTGCCATTGGGAGTACAGAAGACAGATGATTGGAGCACAGACACGTGGGAAGAAGGAGATGGCATGAATAATGGAATTCACAATGCTAGCTCTGAGGGATTATCGCTCTCATCTTGGAGATTTAGGCACAAAATCGCCCTTGGCACGGCTCGAGCATTGGCATTTCTTCACCATGGCTGCTCACCTCCAATCATTCACAGAGATGTTAAAGCTAGCAGTGTCTACTTGGACTATAACTTGGAGCCAAGGTTGTCAGATTTTGGTCTGGCCAGGATCTTTGGAAGCAGCTTGGATGAGGAGATTGCTCGAAGCTCTCCCGGCTATGTTCCACCCGAGTTTTCTCAACCCAAATATGACCTTCCAACACCAAAATCCGATGTTTATTGTTTTGGGGTTGTTCTCTTTGAGCTAATAACAGGAAAGAAACCAGTTGGGGATGATTATCCCGAAGAGAAAGAAGGGACTTTGGTAAGCTGGGTCAGAGCACTGGTAAGAAAGAACTTAGCTTCAAGAGCTATTGATCCAAAAATTAGTGATAGAGGAATTGATGATCAAATTGAAGAAGCCCTTAAGATTGGTTATCTCTGTACTGCTGATCTTCCCTCTAAGAGACCTAGCATGCAGCAGATAGTGGGACTTTTGAAAGATATTGAGCCTTCTGTTGGGGAAAAATCATAA 2481 0.4123 MGFGSFGSIVVLTFFFEHLACRQPNTDDFFVSVFLKNMSLSSSSSSSSSSSKAFNFSASVCSWPGVSCDANKEHVVELKASGSLKILNLSSNQISGSLASNYGNFGLLETFDMSCNDFSGEIPEAISSLVSLRILKLDKNKFEHNIPSGILQCQSLVSIDLSLNQLNGTLPEGFGAAFPKLESLNLAGNNLHGHDSDFSGLKSITSINISANSFQGSFVGMLQEQLEVIDLSRNQFDSKISQVKFKYGWSHLVYLDLSENRLSGEIFQYLNESQNLKHLNLAHNRFASQKFPQIEKLSRLEYMNLSKANLHGHIPAEISQLSNLSLLDVSLNNLIGGIPFQRSENLQILDLSYNNLSGEIPQAVLEKLPSMEKYNFSYNNLTFCSLGINPNILKTAFYGSSDNCPIAANPKLFKRTDEQRKGMKLALALTLSMVCLLSGLLFLAFGCRRKTKSWAIKQTSYKEEQNISGPFSFQTDSTTWVADVKQANSVPVVIFEKPLLSITFSDLLYSTSNFDRGTLFAEGKFGPVYRGFLPSGIHVAVKVLVVGSTLTEQEAAKELEYLGRIKHPNLVPLTGYCFAGDQRIAIYDYMENGNLQNFLHDLPLGVQKTDDWSTDTWEEGDGMNNGIHNASSEGLSLSSWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDYNLEPRLSDFGLARIFGSSLDEEIARSSPGYVPPEFSQPKYDLPTPKSDVYCFGVVLFELITGKKPVGDDYPEEKEGTLVSWVRALVRKNLASRAIDPKISDRGIDDQIEEALKIGYLCTADLPSKRPSMQQIVGLLKDIEPSVGEKS 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0672 826 Pfam Leucine rich repeat 155 213 IPR001611 GO:0005515
Lele17g0672 826 CDD STKc_IRAK 521 818 - -
Lele17g0672 826 SUPERFAMILY Protein kinase-like (PK-like) 489 815 IPR011009 -
Lele17g0672 826 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 75 170 - -
Lele17g0672 826 FunFam Putative LRR receptor-like serine/threonine-protein kinase 475 589 - -
Lele17g0672 826 Gene3D Phosphorylase Kinase; domain 1 474 589 - -
Lele17g0672 826 SUPERFAMILY L domain-like 37 386 - -
Lele17g0672 826 FunFam Calmodulin-binding receptor kinase CaMRLK 224 340 - -
Lele17g0672 826 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 52 241 - -
Lele17g0672 826 Gene3D Ribonuclease Inhibitor 33 289 IPR032675 -
Lele17g0672 826 Gene3D Ribonuclease Inhibitor 290 405 IPR032675 -
Lele17g0672 826 Pfam Protein tyrosine and serine/threonine kinase 520 813 IPR001245 GO:0004672|GO:0006468
Lele17g0672 826 Pfam Leucine Rich repeat 83 96 IPR001611 GO:0005515
Lele17g0672 826 SMART serkin_6 514 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0672 826 Gene3D Transferase(Phosphotransferase) domain 1 590 825 - -
Lele17g0672 826 ProSiteProfiles Protein kinase domain profile. 514 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0672 826 Pfam Leucine Rich Repeat 345 363 IPR001611 GO:0005515
Lele17g0672 826 PRINTS Leucine-rich repeat signature 252 265 - -
Lele17g0672 826 PRINTS Leucine-rich repeat signature 343 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0672 Lele-ChrLele17 18607124 18609720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0672 90 818 Receptor kinase-like Gene Family AT5G07280 32.391 2.23e-106 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Lele17g0672 PK_Tyr_Ser-Thr 3.2e-32 CL0016