Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0670 ATGCCGCTTCACAGTCACACATCGGACCCTATAAAAAGGCTTTCCTCTCTCTTCCGAACCATCCCTTTTACGGCCATGCCTGAGCATCACGCTCTCCGGCCTCCTCCAATTCCAACCCTTGATCGCCGCCCTGTTGAACCAGAGGATAAACCACAAGGTTGTGATATAAAAGAAGGACAACATGATGACGACGATGAAGACGATGATGCGGAGAAGGAACACCGGAAACGAGTCTGTGAAGAACCGTCTTGCGAGTTGCGGAATTGCAAACCTTCGGATGAGGAGGCAGACCCGCGAGAATCTACTTCTGAAACCCTAGTTATGACCTCTTCGGTTGAATCGGTGGTGGCTAGTAAGAGTGCTGATTTACAGGCTAGCTCTCCTACGCGGGCTGATGGCAGAGGTGAAAGTGAGGAGCCAAATGGACCTTCAAACGTGGAAATTGTTGTAAGAGAAACAGTCCAGGGAGCTCAGAATCAGACAGAAGATCGACTCGAGGTGTCTGTATGTCCAACTCTGTTGTCTGTCGTATCACCATCTTCTGTTACACCATCTTTATCATATGTTCCAAGTTCAACTGTACCAGAGCAAAGACTGTCTCCTCAGAATGTTAATAATGTGCATGTGCTGGGAGCAGGCAGGACAAATTCTTCTGGTGGTAAACCTTTATCTGCTGTTAATGTTGCAAGGGCATCTGCATCTGATGGATACAACTGGCGCAAGTATGGTCAGAAGCAAGTGAAGAGTCCAACTGGTTTTCGAAGCTATTACAGGTGTGCTCATTCAGGGTGTAGTGCGAAGAAGATTGAATTTTGCGATCAATCAGGGCATATGATAGAGATTATTTATAAAGGTCAACACAACCATGAGCCACTACGGAAGACTAACACCACTGGGGAAATTAAGTTTATGCCATCTGATGAACCTACTGTGGAAGCCAATCTTCCAGGACAGCCCATTGGAGTGCCCAAGGATGCAAATCCAACCTCTTCTACAAAAGAACCTCTACGAGATTTACCATACAGTGCTGATAAGAAACGGCAAAATTCATCTGGTCTTAGTGAGAATGGCAAATTTATTTTGAAGGTGGAGCATGTTGATGAACCAGAGTTGAAAAGAAGGCAAAATGGTGACTTAACAAACTTGGACTCGCATGTGGAACCTGGAAAGAAATCTAAGCATGTTGTACATGCAGCAGGGGATGTCGGGATATCAGGTGATGGATACAGATGGCGCAAGTATGGACAGAAAATGGTCAGGGGAAATTCCCATCCCAGAAATTACTACCGATGCACGTCTTCTGGATGTCCTGTCCGTAAGCAAATTGAGGCTGCAGTAGATGATCCTAATGCTGTCATCGTCACATATAAAGGAGCACATAACCATGACAAGCCTGTGCCCAAGAAACGGCACGGCCCACCGAGTGCTCCTCTTGTGCCTGCTACTGCCCCTGCCTCGTCAAACAATTTGCAACTCGTGAGTAGTGATTCACAGCAAAACCGAGAAAATTCTGCTCAGTGGTCGGCGGACTCTGAAGAAGAATTAACCCAAGATGCCTCCGACCTTGGGGGTGAGAAAGCAATCGAGTCAGCTAGAACTCTTTTAAGCATGGGTGAAATTAAGCCTTGCTGA 1632 0.4663 MPLHSHTSDPIKRLSSLFRTIPFTAMPEHHALRPPPIPTLDRRPVEPEDKPQGCDIKEGQHDDDDEDDDAEKEHRKRVCEEPSCELRNCKPSDEEADPRESTSETLVMTSSVESVVASKSADLQASSPTRADGRGESEEPNGPSNVEIVVRETVQGAQNQTEDRLEVSVCPTLLSVVSPSSVTPSLSYVPSSTVPEQRLSPQNVNNVHVLGAGRTNSSGGKPLSAVNVARASASDGYNWRKYGQKQVKSPTGFRSYYRCAHSGCSAKKIEFCDQSGHMIEIIYKGQHNHEPLRKTNTTGEIKFMPSDEPTVEANLPGQPIGVPKDANPTSSTKEPLRDLPYSADKKRQNSSGLSENGKFILKVEHVDEPELKRRQNGDLTNLDSHVEPGKKSKHVVHAAGDVGISGDGYRWRKYGQKMVRGNSHPRNYYRCTSSGCPVRKQIEAAVDDPNAVIVTYKGAHNHDKPVPKKRHGPPSAPLVPATAPASSNNLQLVSSDSQQNRENSAQWSADSEEELTQDASDLGGEKAIESARTLLSMGEIKPC 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0670 543 MobiDBLite consensus disorder prediction 27 146 - -
Lele17g0670 543 ProSiteProfiles WRKY domain profile. 228 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele17g0670 543 FunFam WRKY transcription factor 391 466 - -
Lele17g0670 543 Pfam WRKY DNA -binding domain 235 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele17g0670 543 Pfam WRKY DNA -binding domain 407 462 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele17g0670 543 MobiDBLite consensus disorder prediction 102 131 - -
Lele17g0670 543 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 181 501 IPR044810 GO:0003700
Lele17g0670 543 MobiDBLite consensus disorder prediction 42 59 - -
Lele17g0670 543 MobiDBLite consensus disorder prediction 70 101 - -
Lele17g0670 543 SMART WRKY_cls 405 464 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele17g0670 543 SMART WRKY_cls 233 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele17g0670 543 MobiDBLite consensus disorder prediction 458 524 - -
Lele17g0670 543 SUPERFAMILY WRKY DNA-binding domain 231 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele17g0670 543 SUPERFAMILY WRKY DNA-binding domain 401 465 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele17g0670 543 MobiDBLite consensus disorder prediction 481 513 - -
Lele17g0670 543 Gene3D WRKY domain 389 466 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele17g0670 543 Gene3D WRKY domain 223 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele17g0670 543 MobiDBLite consensus disorder prediction 316 354 - -
Lele17g0670 543 ProSiteProfiles WRKY domain profile. 400 465 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0670 Lele-ChrLele17 18595180 18598493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0670 137 543 WRKY Transcription Factor Family AT4G30935 48.926 1.71e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele17g0670 WRKY 1.8e-24 CL0274