Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0664 ATGAGAAAGGGATCGGCAGGACTGAAGTCAATTGGCCGATCGCTTGGATTTGGGGTATCAAGGGCAGTCTTCCCGGAAGACCTTAAAGTGTCAGAGAAGAAGATATTTGATCCTCAAGACAAATTCTTACTCTTGTGGAATAAGCTTTTTATTGTAGTTTGGAGATTTCTTCAGAGGTCAAAAAACTCGGATGTATTAGCAACAAAGGAGGCCTTACTGTTCATTATCTTGCTTCAGTATGTTCCTAGATTGCTTCGGATGGTACCGTTGACTTCAGAAATTACGAGAACAGCCGGTGTCTTCGCCGAAACCGCATGGGCTGGAGCTGCATATTATTTGCTATTATACATGCTAGCTAGTCATGTAGTTGGGGCTTCTTGGTACTTGTTAGCTCTCGAACGCAACGACTCATGCTGGCAGAAGGCTTGTAGTGAAAATGGATGTAACAAAAATTTCTTGTATTGTGGGAACCAGCACTTGGAAGGTTATAGTGCCTGGCAGAATAGAAGCAGAGATATTTTCAATTCACAATGCTCTGTGGATACTGAAAATCCACCTTTTGATTATGGAATTTTTAGCCAAGCATTTTCATCAGGGATTTACACTAGGCCAGGGCTTCAGACCAGCACCTACGCCGGTGAGGTTATATTTTCGATCGCCCTAGCCATTTTCGGGCTTATCCTCTTTGCGCTCCTGATTGGTAACATGCAGACGTACCTTCAGTCTCTTACCATTAGGCTCGAGGAAATGAGAGTCAAAAGACGCGATTCGGAACAGTGGATGCATCATCGCCTGCTCCCCCACGAGCTTAGGGAACGTGTCAGACGCTATGATCAATATAAGTGGTTGGCAACACGCGGCGTAGACGAAGAAAGTTTGGTGCAGAATCTACCGAAGGATCTTCAGAGAGATATTAAGCGTCATCTTTGTCTGGCTTTAGTAAGAAGGGTTCCACTATTTGAGAGTATGGATGAGAGATTACTTGATGCAATTTCTGAGAGACTGAAACCGTGTTTATTTACAGAGAATACTTGCATTGTTCTTGAAGGAGATCCGGTTGATGAGATGCTTTTCATCATCCGTGGTCGCCTCGAGAGTGTTACAACCGATGGCGGGAGAAGTGGTTTTTTTAACCGTACTTTCCTAAAAGAGACAGACTTTTGCGGCGAGGAGCTTTTAACTTGGGCCTTGGATCCCAAGTCAGGTTCCAACCTTCCATCTTCTACAAGAACTGTTAAGACACTTGCAGAGGTTGAGGCTTTTGCACTGATTTCTGAAGATTTAAAGTTTGTTGCTAGTCAATTTAGGCGCCTCCATAGTAGGCAGGTTCAACACACATTCCGGTTTTACTCACAACAATGGAGAACTTGGGCTGCTTGTTTTATTCAAGCAGCATGGCGTCGTTATTGCAAGAGGAAGATTATGGAGCTTCGTCGAAAAGAAGAATCTGAGGAATCAGAAGGAGGAGCTCGCAACAATGCCGGTGGTGGTGGTTCATACAGCATTCGTGCAACCTTCTTAGCCTCAAGATTTGCAGCCAATGCTCTTCGCTGTATACATCGCAATAGGAATGCCAAGACTGCCAGGGAATTGGTTAAACTACAGAAGCCACCGGAGCCTGACTTTACTGCAGATGAATGA 1641 0.4455 MRKGSAGLKSIGRSLGFGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFIVVWRFLQRSKNSDVLATKEALLFIILLQYVPRLLRMVPLTSEITRTAGVFAETAWAGAAYYLLLYMLASHVVGASWYLLALERNDSCWQKACSENGCNKNFLYCGNQHLEGYSAWQNRSRDIFNSQCSVDTENPPFDYGIFSQAFSSGIYTRPGLQTSTYAGEVIFSIALAIFGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPHELRERVRRYDQYKWLATRGVDEESLVQNLPKDLQRDIKRHLCLALVRRVPLFESMDERLLDAISERLKPCLFTENTCIVLEGDPVDEMLFIIRGRLESVTTDGGRSGFFNRTFLKETDFCGEELLTWALDPKSGSNLPSSTRTVKTLAEVEAFALISEDLKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYCKRKIMELRRKEESEESEGGARNNAGGGGSYSIRATFLASRFAANALRCIHRNRNAKTARELVKLQKPPEPDFTADE 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0664 546 Gene3D Helix hairpin bin 247 310 - -
Lele17g0664 546 SUPERFAMILY cAMP-binding domain-like 248 438 IPR018490 -
Lele17g0664 546 FunFam Cyclic nucleotide-gated ion channel 1 317 435 - -
Lele17g0664 546 Gene3D Jelly Rolls 317 437 IPR014710 -
Lele17g0664 546 ProSiteProfiles IQ motif profile. 455 484 IPR000048 GO:0005515
Lele17g0664 546 SMART cnmp_10 319 450 IPR000595 -
Lele17g0664 546 Pfam Ion transport protein 69 245 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele17g0664 546 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 53 542 - -
Lele17g0664 546 SUPERFAMILY Voltage-gated potassium channels 73 241 - -
Lele17g0664 546 ProSiteProfiles cAMP/cGMP binding motif profile. 319 403 IPR000595 -
Lele17g0664 546 FunFam Cyclic nucleotide-gated ion channel 1 246 310 - -
Lele17g0664 546 CDD CAP_ED 319 450 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0664 Lele-ChrLele17 18562074 18565596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0664 51 545 Ion Channels AT5G57940 74.423 0.0 781