Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0652 ATGCAGCAAGGTGATCAGACGGTAATTAGCTTGAGGCCTGGTGGTGGTCGTCCCGGCGGCGGTAGCAGGTTCCTTGCTCCTCGATTCGACTCATCCTCATCGGCTTCCTCTACTCTTGCTTTTGGTTCCTTTGCCTCTGATCCTTGTCGTCCCCATGGCGGTGCTCCTTCTTCGTTTTCTATTAAGGCTGGAGATTCACGGTTTGAGGGTCGTGAGCGTGTGCGATACACTAGGGATCAGCTTTTACAACTGAGGGAGGTCGGTGAGATCCCTGAAGATATTTTAAAAATTAAACGAGATGTAGAAACTGAACTGTTTGGCGAAGATCCAAGCTGGGGCCGTGCAGAAAATTCTGCACAACAATTTCAAAATCGATACTCTGAGCCAGACAACCGTGATTGGCGTGGCCGGTCTGGGCAACTTCCTGCTTCTGCAGAAGAGAAGTCATGGGAAAATCTGAGAGAAAATAGAGAGTTTGGAAATAGGTTTGACTCAAGGCAGCAGGATCGGCAGGATCAACTGAATTCCCAGTTTGCAAGGACAAATATTTCTTCTAATCAAGGAGGACCTGCTCCAACTTTAGTCAAGGCTGACGTTCCATGGTCAGCTAGAAGAGGAAACCTATCTGAAAAGGATCGTGTCTTAAAAACCGTTAAAGGAATTCTAAACAAGCTTACCCCTGAGAAATTTGATGTCCTGAAGGATCAATTGATTGATTCTGGAATTACATCTGCTGACATCTTGAAGGAAGTCATTTCACAGATATTTGATAAGGCTGTACTAGAACCAACATTTTGCCCCATGTATGCTCTTCTTTGTTCAGATCTTAACGAAAAGCTGCCTCCTTTCCCATCTGATGAGCCTGGTGGCAAAGAGATCACTTTTAAGCGAGTACTCTTGAATAACTGTCAGGAGGCTTTTGAAGGCGCTGATAAACTGAGGGAGGAAGAGAGGCAGATGACTGCTCCTGAGCAGGAGATGGAGCATAGGGATAAGGAAAGACTGGTCAAGCTTCGTACTCTTGGGAACATCCGACTAATTGGGGAGCTGTTGAAGCAGAAGATGGTTCCTGAGAAGATTGTCCATCACATTGTTCAGGAACTTTTGGGACCTCCTGATCGCAAGTCATGTCCAGTTGAGGAAAACGTTGAAGCCATATGTCAGTTTTTCAATACTATCGGTAAACAACTTGACGAAAGCCAAAAATCACGGCGTATTAATGACATGTATTTTAGCCGATTGAAAGAACTGAGCTCAAACCCCCAACTTGTATCACGGTTGAGGTTCATGATTCGTGATGTTCTAGATTTACGTGCTAATAACTGGGTTCCAAGACGTGAAGAGGTGAAAGCAAAAACCATCACTGAAATTCATTCAGAAGCTGAAAAGAATCTTGGATTGCGGCGAGGTGCTACCGCAAGCATTAGAAATAACCGTGCTGGAGGTTCTGGTATTCAAGGAAATATAAGCCCTGGTGGATTTCCAATTGCTCGACCTGGTACAGGAGGTATGATGCCTGGAATGCCAGGGACCAGGAAGATGCCTGGGATGCCAGGAATTGATAATGACAACTGGGAAATGCCTAGGAGATCAATGCCAAGAGGAGACATGTCGGGTATGCAAGCTGCAGGACGTGGCCAGTCTCCTTTACATGTGAAGTCGTCAGCCATGAACTCAAAGCTATTACCTCAAGGTAGTGGTGGTCTCATAAGTGGAAGAAGCAGTGCCCTAGTGCATGGTGGTGGTGCTCCTCCCTCTCGTCCATCAAACTTTGTTTCTGGCACTGAGCCTGCGTCTCAAATCCCTACATCTGTGAAAGCTGTTCCTCCTAGCGGGTCTGTTGAGAAGCCACAGACTCCAGCTCCAAAATTAAATTTGGATGAACTTCGCCGCAAAACTGTCTCTCTTCTGGAAGAATATTTCAGTGTTCGTCTAAAAGACGAGGCATTGCGGTGTGTGGAAGAACTAAAGGCTCCATCTTACCACCCTGAGTTTGTTAAGGAGGCCATTGCCCTTGCACTAGATAAAAGTCCACCCTGTGGTGATATTGTCGCCAATCTTCTTGAGCATCTTTTTATTGAGAAGATTCTTACTGCTAGAGATATAGGGACTGGCTGTTTGTTGTTTGGTTCCATGCTAGACGACATCGGAATAGATTTACCTAAAGCACCAAATAACTTTGGTGAGATAATTGGGAAGCTAATTTTGGCCGGGGGATTGGATTTTAAGGTAGTGACAGAGATCCTTAAGAAGGTGGAAGATGACTATTTCCAGAAAGCAATATTTGATGCTGCAACAAGGATCATTAGTTCTGCATCTGGGCAAGCTCTTTTAGATTCACAAGCAGCCGATATCGAGGCTAGCCGCAGCGTGCTCAAGTGA 2382 0.4559 MQQGDQTVISLRPGGGRPGGGSRFLAPRFDSSSSASSTLAFGSFASDPCRPHGGAPSSFSIKAGDSRFEGRERVRYTRDQLLQLREVGEIPEDILKIKRDVETELFGEDPSWGRAENSAQQFQNRYSEPDNRDWRGRSGQLPASAEEKSWENLRENREFGNRFDSRQQDRQDQLNSQFARTNISSNQGGPAPTLVKADVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDVLKDQLIDSGITSADILKEVISQIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPGGKEITFKRVLLNNCQEAFEGADKLREEERQMTAPEQEMEHRDKERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDRKSCPVEENVEAICQFFNTIGKQLDESQKSRRINDMYFSRLKELSSNPQLVSRLRFMIRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRRGATASIRNNRAGGSGIQGNISPGGFPIARPGTGGMMPGMPGTRKMPGMPGIDNDNWEMPRRSMPRGDMSGMQAAGRGQSPLHVKSSAMNSKLLPQGSGGLISGRSSALVHGGGAPPSRPSNFVSGTEPASQIPTSVKAVPPSGSVEKPQTPAPKLNLDELRRKTVSLLEEYFSVRLKDEALRCVEELKAPSYHPEFVKEAIALALDKSPPCGDIVANLLEHLFIEKILTARDIGTGCLLFGSMLDDIGIDLPKAPNNFGEIIGKLILAGGLDFKVVTEILKKVEDDYFQKAIFDAATRIISSASGQALLDSQAADIEASRSVLK 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0652 793 FunFam Eukaryotic translation initiation factor isoform 4G-2 622 783 - -
Lele17g0652 793 Gene3D - 206 442 - -
Lele17g0652 793 Pfam MIF4G domain 215 441 IPR003890 GO:0003723|GO:0005515
Lele17g0652 793 MobiDBLite consensus disorder prediction 27 43 - -
Lele17g0652 793 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 60 777 IPR045208 GO:0003743
Lele17g0652 793 FunFam Eukaryotic translation initiation factor isoform 4G-2 206 442 - -
Lele17g0652 793 Pfam MA3 domain 629 741 IPR003891 -
Lele17g0652 793 SUPERFAMILY ARM repeat 208 444 IPR016024 -
Lele17g0652 793 Gene3D - 621 788 - -
Lele17g0652 793 ProSiteProfiles MI domain profile. 628 750 IPR003891 -
Lele17g0652 793 MobiDBLite consensus disorder prediction 565 621 - -
Lele17g0652 793 SMART if4_15 215 441 IPR003890 GO:0003723|GO:0005515
Lele17g0652 793 MobiDBLite consensus disorder prediction 588 607 - -
Lele17g0652 793 MobiDBLite consensus disorder prediction 108 150 - -
Lele17g0652 793 MobiDBLite consensus disorder prediction 1 63 - -
Lele17g0652 793 SUPERFAMILY ARM repeat 622 772 IPR016024 -
Lele17g0652 793 SMART ma3_7 629 741 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0652 Lele-ChrLele17 18495492 18500879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0652 1 791 Eukaryotic Initiation Factors Gene Family AT5G57870 64.743 0.0 961