Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0644 ATGTTTCTGTTTTTCTGTCTCGTCATTTTTCGCTTTGGGGGGGTTTACGGTGGGGAAGAAAATGCCCTCCAAGTGAATGAGGGAAGTTCACTGAGAGATTTCATGTCGGGAATTGTTTCAGACCCAGAAAACTCTCTAGCTAGTTGGAGATCTCCTGGTGTTCCATTTTGTAATTGGTCAGGAATTGTTTGTAACAATGTGAGTGGGAAAATTACAGAGATTCATCTTGGAAGGAGGTCACTAGGGGGTACGATTTCCCCTTCTCTTGGTAACCTCTCTTCTTTGAAAGTTCTTGATCTTTCTGAAAACTTTTTTGTGGGTCATATCCCAAAAGAGTTGGGGCGTTTAGTTCAGCTTGAAAATCTCACTTTGTATTGGAATCTTGTAGAAGGGAAAATCCCATCAGAGCTGGGTTCACTTCACAATTTACAGTTTTTAGACCTAGGAAGTAATAGGCTTGAGGGTGTGATTCCATCTTCATTGTTCTGCAATTTGTCATCCTCATTGACAGAGTTAGACCTCTCTAACAATTCATTAGTTGGCCAAATTCCCTTGAATAATGAGTGTGTGCTTTATGAGCTTCAGTATATTTTACTTTGGTCTAACCAGCTTGAGGGACTAGTTCCTCTAGCTCTTTCAAACTCCACAAAACTCAAATGGCTTGATTTGGGATCAAACAGGTTTAGTGGTGAGCTACCATCAAAGATTGTAGGGAATTGGCCATATTTACAACTTCTCTACTTACCAAACAATGGCTTTGTTAGCCATGATGGTAATACCAATCTTAAACCATTCTTTGCTTCCTTAGTGAATATGTCTAACCTTCAAGTGCTTGAATTAAATGGAAACTCTCTTGGAGGGAAGCTACCTCATATAATTGGAGATCTTCCAACATCATTGAAGCAACTTCATCTTGAGGAAAACTTCATATATGGTTCCATTCCCTCAGACATTGCCAACCTTTTCAATCTAACTCTATTAAACTTGTCCAGTAACCAACTAAATGGATCAATCCCTCCAAACCTTTCTCTGATAAGTAAGCTTGAGAGAGTTTTTTTGTCCAATAATTCCTTATCTGGTGAGATTCCTTTAACCCTTGGTTATATTCAGCATCTGGGTCTGCTAGATTTGTCAAGAAACAAGCTTTCTGGTCCAATACCAGATAATTTTGCCAATCTTTCCCAGTTAAGAAGGCTTTTACTTTATGATAACCAGCTTTCTGGAACGATACCACCAAGCCTTGGAAACTGTGTCAATTTGGAGATTTTAGACCTATCTCACAACAAGATTTCAGGAGTGATTCCTACAGGAGTTGCAGCCTTAACTAGCTTGAAAATATATTTGAATTTGTCAAGCAATAACTTGGATGGTCCTCTGCCATTAGAGCTCAGCAAAATGGACATGGTTCTAGCTATCGATCTATCTATGAACAACCTCTCTGGTAGAATCCCACCACAGCTTGAAAGTTGCATAGCACTTGAGTACCTTAACCTTTCGGGTAATTCTTTAGAAGGCCCTCTTCCATATTCTTTAGGCCAATTGTTTTACCTTCGAGCACTAGACGTGTCTTTGAATCGATTGACTGGGGAAATACCTCAATCCCTGAAGTTATCTTCTTCTCTCAAAGAACTCAATTTCTCTTTTAATAAATTCTCAGGGAGCGTATCGATTGAGGGAGCATTTTCATCTCTCTCCAGCGACTCTTTCGTAGGAAATGATGGCCTTTGTGGCTCAGTTAAAGGCTTGCCTAGCTGCCATAAGAGACGTAGCCATCATAGCTATCATTTGATTCTCTTGTTAAGTCTTTTGTTGCTCTTTGGCACCCCCATGTTCTACATGGTTGGGCTCAATTCGGGAGTCCGAAAGAGACTAGCCATTGCTAGCATGGAAAACTTGGAACGTGAGGAAGAAAGAAAAGAGCTCTATTACCCAAGAATTTCACATAAACAACTTATTGAAGCCACTGGGGGCTTCAATGCTTCAAACTTGATTGGTTCAGGTCGGTTTGGAAAGGTCTATAAGGGAGTCCTCCAAGACAATACAAGAATAGCAGTGAAAGTGTTAACTGCTACCACCGCTGCTGATATTTCAGGGAGCTTTAATAGGGAATGTCAGATTCTAAAGAAGACAAGACACAGAAACTTAATAAAGATCATCAAAATTTGTAGTAAGCCAGAGTTTAAGGCTCTTGTTCTTCCACTAATGCCAAATGGTAGCCTCGAGAGGCACCTATATCCAAGCAGTGGTTTGAGCCAGAGGTTGGATTTGGTTCAGTTAGTGAAGATCTGCAGTGATGTAGCTGAGGGAATGGCCTATCTCCACCATTACTCTCCAGATAAAGTGGTTCACTGTGATCTTAAGCCAAGTAATATACTTCTTGATGAAGATATGACAGCTCTGGTGACAGATTTTGGAATTTCAAAGCTTGTTAAATTTGATGAAAGCAGCCCCTCTAATAGCTCAACATCTTTGAGTTCAACTCAAGGCTTGCTATTGGGATCTATTGGCTACATAGCCCCTGAGTATGGAATGGGAAAAAATGCCTCAACTAAAGGTGATGTCTACAGTTTTGGAGTACTTCTGCTAGAAATTGTAACAGGCAGGCCCCCTACAGATGTCCTTATCCATGAAGGTTCTAGCTTGCATGAATGGGTTAAGAGACAGTATCCACATAAGCTTGAAGCCATTGTGGAACAAGCATTGGAAAGGTACTTCCCTTTAAGCCACTCTCCGGTGCAACATAAAAAAATCTGGCAAGATGTTATCATGGAACTCATAGAGCTGGGCCTTATTTGCACACAGAACAATCCTTCAACGAGACCAAGCATGCTTGATGTAGCTCAAGAACTTGGGAGGTTGAAAGACTACTTGTCTAATCCATCGCTTCATATGATTGAAGAAGCCAATTGCAAGGATAATATCCTTTCTAATGTGAAGATTGCTCAATAA 2949 0.4049 MFLFFCLVIFRFGGVYGGEENALQVNEGSSLRDFMSGIVSDPENSLASWRSPGVPFCNWSGIVCNNVSGKITEIHLGRRSLGGTISPSLGNLSSLKVLDLSENFFVGHIPKELGRLVQLENLTLYWNLVEGKIPSELGSLHNLQFLDLGSNRLEGVIPSSLFCNLSSSLTELDLSNNSLVGQIPLNNECVLYELQYILLWSNQLEGLVPLALSNSTKLKWLDLGSNRFSGELPSKIVGNWPYLQLLYLPNNGFVSHDGNTNLKPFFASLVNMSNLQVLELNGNSLGGKLPHIIGDLPTSLKQLHLEENFIYGSIPSDIANLFNLTLLNLSSNQLNGSIPPNLSLISKLERVFLSNNSLSGEIPLTLGYIQHLGLLDLSRNKLSGPIPDNFANLSQLRRLLLYDNQLSGTIPPSLGNCVNLEILDLSHNKISGVIPTGVAALTSLKIYLNLSSNNLDGPLPLELSKMDMVLAIDLSMNNLSGRIPPQLESCIALEYLNLSGNSLEGPLPYSLGQLFYLRALDVSLNRLTGEIPQSLKLSSSLKELNFSFNKFSGSVSIEGAFSSLSSDSFVGNDGLCGSVKGLPSCHKRRSHHSYHLILLLSLLLLFGTPMFYMVGLNSGVRKRLAIASMENLEREEERKELYYPRISHKQLIEATGGFNASNLIGSGRFGKVYKGVLQDNTRIAVKVLTATTAADISGSFNRECQILKKTRHRNLIKIIKICSKPEFKALVLPLMPNGSLERHLYPSSGLSQRLDLVQLVKICSDVAEGMAYLHHYSPDKVVHCDLKPSNILLDEDMTALVTDFGISKLVKFDESSPSNSSTSLSSTQGLLLGSIGYIAPEYGMGKNASTKGDVYSFGVLLLEIVTGRPPTDVLIHEGSSLHEWVKRQYPHKLEAIVEQALERYFPLSHSPVQHKKIWQDVIMELIELGLICTQNNPSTRPSMLDVAQELGRLKDYLSNPSLHMIEEANCKDNILSNVKIAQ 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0644 982 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Lele17g0644 982 Gene3D Transferase(Phosphotransferase) domain 1 735 973 - -
Lele17g0644 982 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 346 950 - -
Lele17g0644 982 SMART serkin_6 658 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0644 982 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 266 362 - -
Lele17g0644 982 SUPERFAMILY Protein kinase-like (PK-like) 641 950 IPR011009 -
Lele17g0644 982 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Lele17g0644 982 ProSiteProfiles Leucine-rich repeat profile. 323 345 IPR001611 GO:0005515
Lele17g0644 982 SUPERFAMILY L domain-like 37 256 - -
Lele17g0644 982 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 735 962 - -
Lele17g0644 982 Gene3D Phosphorylase Kinase; domain 1 628 733 - -
Lele17g0644 982 Pfam Leucine Rich repeat 417 432 IPR001611 GO:0005515
Lele17g0644 982 SUPERFAMILY L domain-like 268 566 - -
Lele17g0644 982 CDD STKc_IRAK 664 953 - -
Lele17g0644 982 Pfam Protein kinase domain 660 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0644 982 SMART LRR_sd22_2 140 167 - -
Lele17g0644 982 SMART LRR_sd22_2 417 435 - -
Lele17g0644 982 SMART LRR_sd22_2 272 298 - -
Lele17g0644 982 Gene3D Ribonuclease Inhibitor 26 190 IPR032675 -
Lele17g0644 982 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 61 259 - -
Lele17g0644 982 ProSitePatterns Protein kinases ATP-binding region signature. 664 686 IPR017441 GO:0005524
Lele17g0644 982 SMART LRR_typ_2 191 214 IPR003591 -
Lele17g0644 982 SMART LRR_typ_2 369 392 IPR003591 -
Lele17g0644 982 SMART LRR_typ_2 140 164 IPR003591 -
Lele17g0644 982 SMART LRR_typ_2 272 296 IPR003591 -
Lele17g0644 982 SMART LRR_typ_2 418 441 IPR003591 -
Lele17g0644 982 SMART LRR_typ_2 321 345 IPR003591 -
Lele17g0644 982 SMART LRR_typ_2 393 417 IPR003591 -
Lele17g0644 982 SMART LRR_typ_2 92 116 IPR003591 -
Lele17g0644 982 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 365 589 - -
Lele17g0644 982 ProSiteProfiles Protein kinase domain profile. 658 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0644 982 Pfam Leucine Rich Repeat 142 164 IPR001611 GO:0005515
Lele17g0644 982 Pfam Leucine Rich Repeat 493 512 IPR001611 GO:0005515
Lele17g0644 982 Gene3D Ribonuclease Inhibitor 191 589 IPR032675 -
Lele17g0644 982 ProSiteProfiles Leucine-rich repeat profile. 419 442 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0644 Lele-ChrLele17 18443019 18446207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0644 30 955 Receptor kinase-like Gene Family AT3G47570 35.582 1.09e-158 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele17g0644 Pkinase 6.6e-44 CL0016