Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0635 ATGGGGAAACAAAACAAGAACAGTAACCCTAAGGCAACTAATAACAGTACCAATCTAACAGCAACCACCACCACCAAGAAACGAACCAGGCGAAGTGTCCCCAGAGATTCACCTCTTCAACGTAGCTCAAAATACAGAGGAGTCACTAGACACCGATGGACAGGACGATATGAAGCTCATTTGTGGGACAAGAATTGTTGGAATGAGTCGCAGAACAAGAAAGGACGACAAGGTGCTTATGATGATGAAGAGGCTGCAGCACATGCTTATGATCTAGCAGCGTTGAAATACTGGGGTCAAGATACAATACTCAACTTTCCGTTATCGACCTATCTCAACGAAATGAAAGAAATGGAGGGTCAGTCAAGGGAAGAATATATTGGATCATTAAGAAGGAAAAGCAGTGGTTTTTCCCGGGGAGTTTCCAAATACAGAGGTGTGGCAAGACATCATCATAATGGAAGATGGGAGGCTCGCATTGGCAGAGTTTTCGGCAACAAATATCTTTATCTCGGCACTTATGCTACCCAAGAAGAAGCTGCCACAGCATATGATATGGCGGCCATTGAATACCGAGGGCTTAATGCTGTCACTAATTTTGACCTAAGTCGTTACATTAAGTGGCTTAAGCCCAATATTAATAACAGCGTCAACATGATTAATAACAGTAATACGACTGTGCTTAGTGACTCTAACCCTAACCCTAATTCTGATACTGATTTCACCCCACCACCAAACCCTAATGCTCATCAAGAACATGGATTCAATAATTACTTCTTCACCAACCACCAGGATTCTTCATTCAGTAGCAGTGGGGATGAAATCACCACCGGCTTTGCTCAGTCACGGCAGGCGAATGCCACGTCAGCCCTTGGGCTCCTGCTTCAGTCCTCAAAGTTCAAGGAGATGATGCAGATGACGTCAGTGGCCGATTTGTCGGTGGTGACGCCGGTGCCTGCGAAGCCGGAGGAGTCTAAGTCGTTTCCGCAGGATATTCAGACCTACTTTGAGTGTGAAGACTCCAACAATGGGTATGGAGAAGGGGATTATACAGTGTTCAGTGAGCTCAATTATAATTCTTTTGCTTCGCCTATGTTCAATTATCATGACTTTGAGACATGA 1122 0.4465 MGKQNKNSNPKATNNSTNLTATTTTKKRTRRSVPRDSPLQRSSKYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEAAAHAYDLAALKYWGQDTILNFPLSTYLNEMKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNINNSVNMINNSNTTVLSDSNPNPNSDTDFTPPPNPNAHQEHGFNNYFFTNHQDSSFSSSGDEITTGFAQSRQANATSALGLLLQSSKFKEMMQMTSVADLSVVTPVPAKPEESKSFPQDIQTYFECEDSNNGYGEGDYTVFSELNYNSFASPMFNYHDFET 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0635 373 Pfam AP2 domain 142 193 IPR001471 GO:0003700|GO:0006355
Lele17g0635 373 Pfam AP2 domain 43 99 IPR001471 GO:0003700|GO:0006355
Lele17g0635 373 SUPERFAMILY DNA-binding domain 43 109 IPR016177 GO:0003677
Lele17g0635 373 CDD AP2 142 203 IPR001471 GO:0003700|GO:0006355
Lele17g0635 373 FunFam AP2-like ethylene-responsive transcription factor 43 109 - -
Lele17g0635 373 MobiDBLite consensus disorder prediction 1 27 - -
Lele17g0635 373 FunFam AP2-like ethylene-responsive transcription factor 142 203 - -
Lele17g0635 373 ProSiteProfiles AP2/ERF domain profile. 44 107 IPR001471 GO:0003700|GO:0006355
Lele17g0635 373 MobiDBLite consensus disorder prediction 1 47 - -
Lele17g0635 373 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 15 273 - -
Lele17g0635 373 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Lele17g0635 373 PRINTS Ethylene responsive element binding protein signature 183 203 IPR001471 GO:0003700|GO:0006355
Lele17g0635 373 SUPERFAMILY DNA-binding domain 142 203 IPR016177 GO:0003677
Lele17g0635 373 MobiDBLite consensus disorder prediction 224 246 - -
Lele17g0635 373 Gene3D AP2/ERF domain 142 203 IPR036955 GO:0003700|GO:0006355
Lele17g0635 373 Gene3D AP2/ERF domain 43 109 IPR036955 GO:0003700|GO:0006355
Lele17g0635 373 ProSiteProfiles AP2/ERF domain profile. 143 201 IPR001471 GO:0003700|GO:0006355
Lele17g0635 373 SMART rav1_2 44 113 IPR001471 GO:0003700|GO:0006355
Lele17g0635 373 SMART rav1_2 143 207 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0635 Lele-ChrLele17 18385917 18388523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0635 24 230 AP2-EREBP Transcription Factor Family AT1G72570 61.502 1.94e-84 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele17g0635 AP2 1.8e-09 CL0081