Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0633 ATGCCCCTGTTCTTGCAAGATTCTAGGGCTTTTTATCTTCTCATCATGCCAGATTTAGGAAGCTTATCGCTCTCAGAAGCTCTTGAGCTGCCTCACTGCCCTAATCTCAATGCCCCTGCCGAACCATCTGATCTTAATAGTTCTTTGTACACAGTCCCAGTTAAAACCCTTGGTAATTGTTACATTTCCAACCACAATCTTCTATTCCCTGTTCTTCAGCAGGACGAGGCCCAGAGTGGAAATGAATTCAGGGTTTCAACGCGGAGCCGGGGTTCTTTGGATCGGCTCAATAAGGCAGCCAACGACAAGGGTTCAGAGGATCATGTGAAAGATTGGTCTGAGAAGAAGATAGATTCCGGGTTTTGTAGGCTCAGCTGCACTCTCCCATTTCTTGTTGGTGCTCCGAAGATGGTTGAATGTCTTTTTTGTCATCATTTCGTCTACCCCGGGAAGGAGGTTATATGTTCTGTTCGTGGCTGTGAAAGAATCTACCATATGGAATGTGCGAAAGAAGCTGGTGGGATCTCAAATCTCAAAAAATTCAAGTGCCCACATCATGCTTGCTTTATTTGCAAACAAAAATTGCACTTGCGGTGTGAGCGATGTACAATGGCATTTCATACTAAATGCGCACCGTGGCCAGATGCTGTAGTGCTTTCAAAGGATCATCCTGGACGAGCTGTTTGTTGGAGGCATCCTACTGATTGGCGGTTGGATAGAAAGCATGAAGCTTCAACAAGTAACATGGAGGAAGTGTTTTGCCGTTTGCCTCTTCCTTATATCAACGAGGAGTTCAAGATTGATTTCACGTGGAAAGACATGGAGAGTAAGGTTGAACCTCCTCCATATGTACACATAAGACGCAATGTATACCTCGTGAAGAAGAAGCGCAGTGATTCAGATGACGGCGCAGGGTGCACCAGTTGCCCTTCTAATTCTACATGCTCTGATGATTGCGTGTGCAGAGTTCAATGCATAAGCTGCTCTAAGGCTTGTCGCTGCTCAGAAAATTGCAATAATAGACCATTTCGCAAGGATAAAAAGATCAAGATTGTCAAGACTGAACTTTGTGGTTGGGGAGTAGAAGCCGCTGAAACCATCAAGAGAGGCGAATTTGTAATTGAATATATTGGAGAAGTAATAGATGATGCTTTATGTGAAAAAAGGCTTTGGGACATGAAATACAAAGGCGAACAGAATTTTTATATGTGTGAGATTCGGAAAGACTTCACAATAGATGCAACTTTCAAAGGAAATACATCACGCTTCTTAAACCATAGCTGTGATCCCAACTGTGTTTTAGAGAAGTGGCAAGTTGATGGTGAAACACGCGTCGGTGTCTTTGCCTCACGCGCAATAGAAGTCGGAGAACCGTTAACATACGATTACAGATTTGTGCAATTTGGACCGGAGGTAAAATGCCACTGTGGTGCTCCAAATTGTCAAGGCTTTTTAGGGACCAAAAAGAAGATTGACAAGGTGAACCTTTGCTGGGGCTCAAAACGGAAGAGAACATGTATTACAGTGGGGGGGACCAAAAAGGGAACTTCACCTACTTGCATTGCAATAGTAACAGCTGTATGA 1584 0.4388 MPLFLQDSRAFYLLIMPDLGSLSLSEALELPHCPNLNAPAEPSDLNSSLYTVPVKTLGNCYISNHNLLFPVLQQDEAQSGNEFRVSTRSRGSLDRLNKAANDKGSEDHVKDWSEKKIDSGFCRLSCTLPFLVGAPKMVECLFCHHFVYPGKEVICSVRGCERIYHMECAKEAGGISNLKKFKCPHHACFICKQKLHLRCERCTMAFHTKCAPWPDAVVLSKDHPGRAVCWRHPTDWRLDRKHEASTSNMEEVFCRLPLPYINEEFKIDFTWKDMESKVEPPPYVHIRRNVYLVKKKRSDSDDGAGCTSCPSNSTCSDDCVCRVQCISCSKACRCSENCNNRPFRKDKKIKIVKTELCGWGVEAAETIKRGEFVIEYIGEVIDDALCEKRLWDMKYKGEQNFYMCEIRKDFTIDATFKGNTSRFLNHSCDPNCVLEKWQVDGETRVGVFASRAIEVGEPLTYDYRFVQFGPEVKCHCGAPNCQGFLGTKKKIDKVNLCWGSKRKRTCITVGGTKKGTSPTCIAIVTAV 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0633 527 FunFam Histone-lysine N-methyltransferase 260 497 - -
Lele17g0633 527 CDD SET_ASHR3-like 348 486 - -
Lele17g0633 527 Gene3D SET domain 261 505 IPR046341 -
Lele17g0633 527 ProSiteProfiles Post-SET domain profile. 470 486 IPR003616 -
Lele17g0633 527 PANTHER SET DOMAIN PROTEINS 97 504 - -
Lele17g0633 527 SUPERFAMILY SET domain 272 483 IPR046341 -
Lele17g0633 527 SMART set_7 347 470 IPR001214 GO:0005515
Lele17g0633 527 Pfam SET domain 358 463 IPR001214 GO:0005515
Lele17g0633 527 SMART PHD_3 188 233 IPR001965 -
Lele17g0633 527 SMART PHD_3 139 187 IPR001965 -
Lele17g0633 527 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 236 IPR013083 -
Lele17g0633 527 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 16 517 IPR025787 -
Lele17g0633 527 SMART PostSET_3 470 486 IPR003616 -
Lele17g0633 527 ProSiteProfiles AWS domain profile. 301 347 IPR006560 GO:0005634|GO:0018024
Lele17g0633 527 ProSiteProfiles SET domain profile. 347 464 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0633 Lele-ChrLele17 18371409 18376543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0633 328 485 C2H2 Transcription Factor Family AT2G23740 37.989 4.21e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele17g0633 SET 6.4e-19 No_clan