Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0630 ATGAATTCTGAATTTCATATTTCATGTCCCTTTGTGAAATATGATCATTACGACCATTGTTCCATAATCATGTCTCTTCCTTGGGTTTATCTTCTCTTATTTCTCTCTTGTTCTGGACTCTGTTTCTCTTACGAGCCTCGTAACCATGAAGTGGAAGCTTTGATAAGCATAAGAGCTTCTTTGAATGATCTTCATGGAGTATTAAGCAACTGGGATGAAAACTCAGTAGACCCTTGTAGTTGGGCTATGATCACTTGCTCTTCTGATTCTCTTGTTATAGGCTTGGGAGCTCCAAGCCAATCTCTTTCTGGAACTTTATCTGCTGCCATGGGAAATCTGACAAATCTTCGACAAGTGTTACTGCAGAACAACAATATTTCTGGCCAAATCCCACCGGAACTTGGTAGCCTTCCTAAGTTACAGACTTTAGATCTTTCTAACAATCGATTCTCTGGTGTGATTCCCAGTTCCTTAAGTCACTTGGATGGTCTTAAGTACTTGAGGCTGAACAACAATAGCATGTCTGGGCCCTTTCCTGTGTCACTAGCCAAAATCCCTCAACTTGCTTTCTTAGACTTGTCTTATAACAATCTTAGTGGACCTGTGCCGAAGTTTCCAGCGCGATCTCTCAATGTTGTGGGAAACCCATTAATTTGTGGGAGTAGTTCTACTGAAGGTTGCTCTGGATCAACAACCCTCTTGCCTGTTTCGTTTTCTCTTTCAACCTCACAAGGAAAGCACAAGTCCAAGAAAATAGCGATTGCACTTGGGATTGGCCTTAGCTTTGCCTGTATCACACTGTTGTCTTTAGGACTTTTCTGGTATAGAAAGAAAAGACAGCACAGAGCACTTTTGTATATCAGTGATTATCAGGAAGATGGACTCATTCGCTTGGGGAATCTCAATATTTTCACCTTCAAAGAGCTCCAACATGCAACAGATAATTTCAGCTCTAAGAACATACTTGGTGCTGGTGGTTTTGGCAATGTGTATCGAGGTAAGCTCGGAGTTGGGACTCTGGTTGCCGTGAAGAGGTTGAAGGATGTCACTGGAAGTGCTGGGGAATCACAGTTTCGAACTGAATTGGAGATGATCAGCTTGGCAGTTCACCGCAATTTACTTCGCTTAATCGGATATTGCGCTACTCCTAACGAGAAGCTTCTGGTTTATCCTTACATGTCTAATGGAAGTGTGGCATCCAGACTTAGAGGCAAACCGGCGCTAGATTGGAACACGAGAAAGAGGATAGCGATCGGAGCTGCGAGAGGTCTTCTGTATCTACATGAGCAGTGTGATCCAAAGATAATACATAGAGATGTTAAGGCTGCTAATGTGCTTCTGGATGAGTATTATGAAGCTGTTGTTGGTGATTTTGGCCTCGCTAAGCTCCTTGATCATGCTGACTCTCATGTCACTACTGCTGTTCGAGGCACTGTAGGGCACATCGCGCCAGAGTACCTCTCCACCGGCCAGTCATCGGAAAAAACTGATGTGTTTGGATTTGGCATTCTCTTGTTGGAGCTCATAACTGGAATGACGGCTCTCGAGTTTGGGAAAACAGTGAATCAGAAAGGTGCAACGCTAGAGTGGGTGAAGAAAATACAGCAAGAGAAGAAGGTGGAAGTGTTGGTGGACAAAGAGTTAGGAAGAAACTATGATAGGATAGAGGCGGGGGAGATGTTGCAAGTAGCTTTACTTTGCACTCAGAATCTACCGATTCACCGCCCCAAAATGTCGGAAGTGGTCCGAATGCTCGAAGGCGATGGCCTCGCCGACAAATGGGCGGCTTCACAGAATCACAATAATCTCAACATGAACAACAATACCTTTCACAGACACAGTAACAACAATAGTTCATCTTCTCGCCCAAGCACCACCACCACCCTTGCTTCAAAACATGATGATGATGATAATAATAATGCTCATGATCGTCCCACTATGTTTGGCATGGGAATTGATGGTGATGATGATGATGAACACTCTTTGGATTCCTATGCCATGGAACTCTCTGGTCCTAGGTAA 2022 0.4387 MNSEFHISCPFVKYDHYDHCSIIMSLPWVYLLLFLSCSGLCFSYEPRNHEVEALISIRASLNDLHGVLSNWDENSVDPCSWAMITCSSDSLVIGLGAPSQSLSGTLSAAMGNLTNLRQVLLQNNNISGQIPPELGSLPKLQTLDLSNNRFSGVIPSSLSHLDGLKYLRLNNNSMSGPFPVSLAKIPQLAFLDLSYNNLSGPVPKFPARSLNVVGNPLICGSSSTEGCSGSTTLLPVSFSLSTSQGKHKSKKIAIALGIGLSFACITLLSLGLFWYRKKRQHRALLYISDYQEDGLIRLGNLNIFTFKELQHATDNFSSKNILGAGGFGNVYRGKLGVGTLVAVKRLKDVTGSAGESQFRTELEMISLAVHRNLLRLIGYCATPNEKLLVYPYMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDEYYEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTVNQKGATLEWVKKIQQEKKVEVLVDKELGRNYDRIEAGEMLQVALLCTQNLPIHRPKMSEVVRMLEGDGLADKWAASQNHNNLNMNNNTFHRHSNNNSSSSRPSTTTTLASKHDDDDNNNAHDRPTMFGMGIDGDDDDEHSLDSYAMELSGPR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0630 673 Pfam Leucine rich repeat 138 198 IPR001611 GO:0005515
Lele17g0630 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Lele17g0630 673 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Lele17g0630 673 Gene3D Ribonuclease Inhibitor 47 229 IPR032675 -
Lele17g0630 673 SUPERFAMILY L domain-like 48 220 - -
Lele17g0630 673 FunFam Somatic embryogenesis receptor kinase 1 286 392 - -
Lele17g0630 673 PRINTS Leucine-rich repeat signature 140 153 - -
Lele17g0630 673 PRINTS Leucine-rich repeat signature 185 198 - -
Lele17g0630 673 FunFam Somatic embryogenesis receptor-like kinase 1 393 605 - -
Lele17g0630 673 Pfam Protein tyrosine and serine/threonine kinase 319 585 IPR001245 GO:0004672|GO:0006468
Lele17g0630 673 Pfam Leucine rich repeat N-terminal domain 48 87 IPR013210 -
Lele17g0630 673 Gene3D Transferase(Phosphotransferase) domain 1 393 605 - -
Lele17g0630 673 ProSiteProfiles Protein kinase domain profile. 316 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0630 673 MobiDBLite consensus disorder prediction 601 673 - -
Lele17g0630 673 SMART serkin_6 316 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0630 673 FunFam Putative LRR receptor-like serine/threonine-protein kinase 47 229 - -
Lele17g0630 673 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 30 596 - -
Lele17g0630 673 Gene3D Phosphorylase Kinase; domain 1 286 392 - -
Lele17g0630 673 MobiDBLite consensus disorder prediction 601 628 - -
Lele17g0630 673 SUPERFAMILY Protein kinase-like (PK-like) 298 586 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0630 Lele-ChrLele17 18348215 18352957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0630 22 531 Receptor kinase-like Gene Family AT2G23950 75.586 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele17g0630 Pkinase 6e-41 CL0016