Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0603 ATGACCATGTCAAGACTGAGGAAGAAGAGCTTTAACCTTTGCATCTGGTTGCGTTGCTTTTGTACTACTTTTTTGCTATGGTTCTTTATAGAACCTTGCAAGGCAAAAAAGGAGGCACGGATACCAGTAGGGTTAGTTGTTGATCTTAACTCGTCAATTGGAATTATGGCCATGCGCTGCATACAAATGGCTCATCAAGACTTCTATAAGCACTATTCTCATTACCAAACAAGACTTGATCTGAGAATCAGGGATTCTCAGAATGATGTCGTCATAGCAGCTTCTGCAGCTTTCGATTTGATGAGGAATGAAAAGGTGCATGCAATCATCGGACCTTCATTTTCAGAACAAGCGAGATTCGTAATACAACTTGGGCACAAATATCTGGTGCCCATCGTCTTGTTTTCAGCCACAAGTCCATCTCTTCCTCCAATCCGAAGTAAATATTTCGTAAGGACAGCACAAGATGATCGCTCACAGGTGAATGCTATAGCCGCCATTGTTGAAGCTTACGGATGGCACGAAATCATCCCAATCTACGAAGACACCGAATATGGCAACGGTCTGATCCCATATCTCACAGACGCCTTGGAAGAAGTAAACACACGAGTGCCTTGCAGAAGTGCCATTGATCCAAATTCTGAGGAATCCGAAATCTTAGAGGAGCTGAAGAAGTTAAATCAAACTGGGAAAAGAATATTTCTCGTTCACATGACAAGTCTTGTTGGGCCCAAATTCTTCTCAGCCGTGAACAAAGCTGGAATGATGAGGGAAGGGTATGGGTGGATTGTCAGCGATGGATTATCCAATATGTTAGAACCTTTGGGTCCAAAAGTGATGGATTCTATGCAAGGTGTCTTGGGGGTAAGGCCAAAAGTGGAAAAGTCTAGAAAGCTTACAAGTTTCAGAAATAAATGGAAAGCTTTGTCAATTAAACCTCCATTAACGTTGTTTGGACTTTGGGCTTATGATACAGTTTGGGCGATAGCCATGGCAGTAGAATCTACGCTTGCAGATTCTAAGGGTAATGAGACACTTATAGATAGGATCCTAGATACTAAATTCGAAGGGCTTTCAGGGGATTTCAATTTGAGTGAAGGACATCTCAAACCCTTAGAGCTTGAAGTATTCAATGTGGTAGGACGCAAAGAGAGGGTCATTGGACGTTGGAGCCCAGAGAGAGGACTATTCCACGAGAAACTAAGGGCACCAATATGGCCGGGGGACACAACAAATCAACCAACCAAGTTAATAATTGGGGTTCCTGTAAGAAAGCGTTTTGTTGAATTCTTGAAGGTGGAAAGACGTTCTTCAAATAGTGCTCCAGATATTTCTGGCTTTACTATTGATGTGTTTCTCGAAGCGTTTCCACTAAAATCTCCGTTAGTGTCTTATTTTTCAAGGGCAATCCTGAATGTGACTCAAGATGAAGAAAAATTTGATAGGATTAGGAGCAGGTACTTCTCCAGAAGAATCATATCTGAAGATGAAAGTGAATCATCAATTCCAAACAGTCAAACGAGTCTTACAGTGTCAAGCTTTGGAGGGCTCTTCATCATCACAGGGGTCACTTCTGGGATTTCACTTGTCTTCTATTTGTTCAAGTTTGGCTACTCTCATCTGTCAGAAGAAAGGTGCCTTTGGTTGTTGCAGTTAAAGGCTCGAATAGTGAAGTGCTTATTGGATCGAAAGAATAGCTCTTTATCTTTGAATAGAGGCGATTCCAGAGTATACTCTACGAGTAATATTGTAGAGGAAGTTAAAGCAATTACTGCCCAGAATGAACAAGAACAGCTACGTTCTCCAGAGCATAGTGACACCATTCAACGTGAGCATCAGTCATCATAG 1848 0.4183 MTMSRLRKKSFNLCIWLRCFCTTFLLWFFIEPCKAKKEARIPVGLVVDLNSSIGIMAMRCIQMAHQDFYKHYSHYQTRLDLRIRDSQNDVVIAASAAFDLMRNEKVHAIIGPSFSEQARFVIQLGHKYLVPIVLFSATSPSLPPIRSKYFVRTAQDDRSQVNAIAAIVEAYGWHEIIPIYEDTEYGNGLIPYLTDALEEVNTRVPCRSAIDPNSEESEILEELKKLNQTGKRIFLVHMTSLVGPKFFSAVNKAGMMREGYGWIVSDGLSNMLEPLGPKVMDSMQGVLGVRPKVEKSRKLTSFRNKWKALSIKPPLTLFGLWAYDTVWAIAMAVESTLADSKGNETLIDRILDTKFEGLSGDFNLSEGHLKPLELEVFNVVGRKERVIGRWSPERGLFHEKLRAPIWPGDTTNQPTKLIIGVPVRKRFVEFLKVERRSSNSAPDISGFTIDVFLEAFPLKSPLVSYFSRAILNVTQDEEKFDRIRSRYFSRRIISEDESESSIPNSQTSLTVSSFGGLFIITGVTSGISLVFYLFKFGYSHLSEERCLWLLQLKARIVKCLLDRKNSSLSLNRGDSRVYSTSNIVEEVKAITAQNEQEQLRSPEHSDTIQREHQSS 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0603 615 CDD PBP1_GABAb_receptor_plant 43 397 IPR044440 -
Lele17g0603 615 Pfam Receptor family ligand binding region 59 380 IPR001828 -
Lele17g0603 615 FunFam Glutamate receptor 156 311 - -
Lele17g0603 615 Gene3D - 61 162 - -
Lele17g0603 615 Gene3D - 322 426 - -
Lele17g0603 615 SUPERFAMILY Periplasmic binding protein-like I 40 391 IPR028082 -
Lele17g0603 615 MobiDBLite consensus disorder prediction 594 615 - -
Lele17g0603 615 Gene3D - 163 321 - -
Lele17g0603 615 PANTHER OS06G0188250 PROTEIN 20 375 - -
Lele17g0603 615 MobiDBLite consensus disorder prediction 599 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0603 Lele-ChrLele17 18140414 18143534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0603 8 457 Ion Channels AT5G27100 37.600 1.08e-109 348