LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele17g0602	ATGGCCATGTCAAGCCAGAAGAAGAGCTTTAACATTTGCCTCTGGTTTCGTTGCCTTTGTAGTCTGCTATGGTTCTTTGTAGAACCTTCGAAGGCGAAGGAGGCACAAGTACCAGTAGGGGTAGTTGTTGATAACAGCTCCTCCATTGGAAGTATGGCCATGCGCTGCATAAAAATGGCACATCAAGACTTCTATAAACACCATCCTCATTACCAAACAAGACTTGATCTTAAATTCAGGGATTCTGAGAACGATGTCGTCAGAGCAGCATCTGCAGCTTTCGATTTGATGAGGAATGAAAAGGTCCGTGCAATTATCGGACCTTTATATTCAGAACAAGCGAGGTTCGTAATACAACTTGGGGACAAAGTTCATGTGCCAATCGTCTCGTTTTCAACCACAAGTCCATCTCTTTCTTCAATCCGAAGCAAATTTTTCATAAGGATAGCACAAGATGACCGCTCACAGGTGAATGCTATAGCCGCCATTGTTGAAGCTTACGGATGGCACGAAATCATCCCAATCTACGAAGACACCGAATATGGCAACGGTCTGATCCCATATCTCACAAACGCCTTGGAAGAAGTAAACACACGAGTGCCATGCAGAAGTGCCATTGATCCAAATTCTGAGGAATATGAAATCTTAGAGGAGCTGAAGAAGTTAAATCAAACTGGAAAAAGAATATTTCTCGTTCACATGACAAGTCTTGTTGGGCCCAAATTCTTCTCAGCCGTGAACAAAGCTGGAATGATGAGGGAAGGGTATGGGTGGATTGTCAGCGATGGATTATCCAATATGTTAGAACCTTTGGATCCAAAAGTGATGGATTCTATGCAAGGTGTCTTGGGGGTAAGGCCAAAAGTGGAAAAGTCTAGAAAGCTTACAAGTTTCAGAAATAAATGGAAAGCTTTGTCAATTAAACCTCCATTAACGTTGTTTGGACTTTGGGCTTATGATACAGTTTGGGCGATAGCCATGGCAGTAGAATCTACGTTTGCAGATTCTAAGGGTAATGAGACACTTATAGATAGGATCCTAGATGCTAAATTAGAAGGGCTTTCTGGGGATTTCAATTTGAGTGAAGGACATCTCAAACCCTTAGAGCTTGAAGTATTCAATGTGGTAGGACGCAAAGAGAGGGTCATTGGATACTGGAGCCTAGAGAGAGGACTATTCCACGGGAACCATTCGAGTTCAAGAGATCGTCAGAAACTAATGGCACCCTTATGGCCAGGAGAGACAACAAATCAACCAACCAAGTTGAGAATTGGGGTACCTGTAAGAAAGGGTTTTGTTGAATTCTTGAAGGTGGAAACACGATCTTCAAGTAGTACTCCAGATGTTTCTGGCTTTACTTATGATGTGTTTCTCGAAGTGGTTAAAGCTTTACCTTTTCCTCTTCCATACGAGTTTTTCCCATTCCAGAAGAAGAATGGCGAAACTACCGAGTCCTATGATGAACTTGTTCTCCAAGTTGAGAAAAAGGCAAGTTTTAGTACTATTCCTATTTGTCCAAAATCAGGAGTTTCAATGGTTGTTTCGATGAAGCACGATGAGAGACAAAACATGTGGATCTTCTTAAAGCCTTTGAGTCCAGGTCTTTGGCTGACCACGGGTGCAGCATTTGTGCTCACTGGTATCATTATATGGCTTCACGAACGTCGTACAAACACAGAATTTCAAGGATCCCCACAGCAACAACTTGGCATTATGTTCTGGTTTTCTTTCTCCACCTTAGTCTTTGCTCACAAGGAAAGGTTAGTGAACAATTGGTCGCGTTTTGTGCTGATCTTATGGGTATTTGTTGTGCTGATCATAACACAAAGCTACACTGCAAGTTTAGCTTCCATGTTAACTGTGCAAAGATTGCAGCCAAAGTTCATCGATGTCAATGAAATAAAAAGGAATAATTACTGTGTGGGGTATATGAAGGGGTCGTTCGTGAAAACGCTTCTGAGAAATCAATTGGGATTTCAGGATGAGACAAAGTTGAAGCTGTAA	2004	0.4197	MAMSSQKKSFNICLWFRCLCSLLWFFVEPSKAKEAQVPVGVVVDNSSSIGSMAMRCIKMAHQDFYKHHPHYQTRLDLKFRDSENDVVRAASAAFDLMRNEKVRAIIGPLYSEQARFVIQLGDKVHVPIVSFSTTSPSLSSIRSKFFIRIAQDDRSQVNAIAAIVEAYGWHEIIPIYEDTEYGNGLIPYLTNALEEVNTRVPCRSAIDPNSEEYEILEELKKLNQTGKRIFLVHMTSLVGPKFFSAVNKAGMMREGYGWIVSDGLSNMLEPLDPKVMDSMQGVLGVRPKVEKSRKLTSFRNKWKALSIKPPLTLFGLWAYDTVWAIAMAVESTFADSKGNETLIDRILDAKLEGLSGDFNLSEGHLKPLELEVFNVVGRKERVIGYWSLERGLFHGNHSSSRDRQKLMAPLWPGETTNQPTKLRIGVPVRKGFVEFLKVETRSSSSTPDVSGFTYDVFLEVVKALPFPLPYEFFPFQKKNGETTESYDELVLQVEKKASFSTIPICPKSGVSMVVSMKHDERQNMWIFLKPLSPGLWLTTGAAFVLTGIIIWLHERRTNTEFQGSPQQQLGIMFWFSFSTLVFAHKERLVNNWSRFVLILWVFVVLIITQSYTASLASMLTVQRLQPKFIDVNEIKRNNYCVGYMKGSFVKTLLRNQLGFQDETKLKL	667

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele17g0602	667	CDD	PBP1_GABAb_receptor_plant	39	393	IPR044440	-
	Lele17g0602	667	SUPERFAMILY	Periplasmic binding protein-like II	414	656	-	-
	Lele17g0602	667	Gene3D	-	65	158	-	-
	Lele17g0602	667	Pfam	Ligand-gated ion channel	535	636	IPR001320	GO:0015276\|GO:0016020
	Lele17g0602	667	Gene3D	-	159	319	-	-
	Lele17g0602	667	FunFam	Glutamate receptor	524	654	-	-
	Lele17g0602	667	Gene3D	-	415	508	-	-
	Lele17g0602	667	FunFam	Glutamate receptor	152	307	-	-
	Lele17g0602	667	PANTHER	OS06G0188250 PROTEIN	12	371	-	-
	Lele17g0602	667	SUPERFAMILY	Periplasmic binding protein-like I	36	387	IPR028082	-
	Lele17g0602	667	Pfam	Receptor family ligand binding region	55	376	IPR001828	-
	Lele17g0602	667	Gene3D	-	520	662	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele17g0602	Lele-ChrLele17	18124874	18127248	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele17g0602	34	659	Ion Channels	AT2G24720	39.150	6.37e-166	498