Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0601 ATGGCAAGCCTAAATTACCATCGTTATGGCTACCTTATAACGATTTCTTGTGTTGTGTTGTTGATAGCTGAGATTGGAGCAGGCGATGATGAAGCTGGTTTACTCCTAGGAGGGAAGAAGTTAATACTTGGACTTCCTAAGAAAACAGGCTTCACTCAGTTTGTGGATTTACAACTGAATTCAAGTAATAAGAATGAGGTCGTCAAGGCTACGGGCTATTCCATGGACGTCTTCGAAGCTGCAATAGCTTACCTTAAGCGTTCACATTACAATATTTCTTTCGAGTTTAGAGCTTTCGTAGACGAACATGGAAACAGTGCTGGGAATTACGATGCCCTCGTCTATCAGATTTTTGAAGGGAAGTTTGATGCTGTGGTGGGAGATGTGTCTATTTTGGCATATAGATCAAACTATGTTGACTTTACATTACCATATGCACCGTCTGATGTGAGGATGCTTGTGAAGGTTCGCCATGATCCACGGTTGAATATGTGGATTTTTGTGCGACCTTTTAGTTGGGATCTATGGTTGTCTATTGTCATCTCCAGTATTTTTATTGGAGCTATCATATTGTTAATGGAACGTAATGTCAAGGAAGATTCAGCATTAAAAAATTCACCATATAGGAAACAACTCAGTGGGGTTTCTATCTTCTGGCTTCCAGTAGAACAAGCAGTTCTTCCTGAAAGTGAAGTAGTGGTGAAGAATTGTTCTAAGTTTGTGCTCTTGATGTGGTTGATACTAGCATTTGTGCTAATGCAAAGTTACACAGCAAGCTTGTCATCAATATTAACAGTACATCAGCTACAACTTCGTTACCTTAGTGAGTATGACGTTATAAATGACCCCAACATTAATGTTGGCTACCACCATGGCTCATTCATCGAAGGTTTATTGGTCGATGACTTGAAGATTGATAGGTCTAGAGTGAAGAACTACCCTGACATTAAAGAATATAAGGAGGCTTTGGACAAAGGAAGCCAAAAGGGTGGTGTCGACGCTATTTTTGATCATATTTCCCATATTAAGGTCTTCCTTAAGCAATATGGTTCCAATTATGCCATGGTCGAAACTAGACATCGCATTGCTGGATTCGCTTTTGCATTCCCAAGGGGCTCCAACTTAACCTCGTACTTTTCAAGAGCCATATTAAAGGTCTATTCATGGCAGTTCTTCCTGAAAGAGAATCAGTGTCCAAAGCATGCTCTAGGCACCGCAATGATGGATATGGTTTTGCATTCCCCAAGGGCTCCAACTTAA 1260 0.4056 MASLNYHRYGYLITISCVVLLIAEIGAGDDEAGLLLGGKKLILGLPKKTGFTQFVDLQLNSSNKNEVVKATGYSMDVFEAAIAYLKRSHYNISFEFRAFVDEHGNSAGNYDALVYQIFEGKFDAVVGDVSILAYRSNYVDFTLPYAPSDVRMLVKVRHDPRLNMWIFVRPFSWDLWLSIVISSIFIGAIILLMERNVKEDSALKNSPYRKQLSGVSIFWLPVEQAVLPESEVVVKNCSKFVLLMWLILAFVLMQSYTASLSSILTVHQLQLRYLSEYDVINDPNINVGYHHGSFIEGLLVDDLKIDRSRVKNYPDIKEYKEALDKGSQKGGVDAIFDHISHIKVFLKQYGSNYAMVETRHRIAGFAFAFPRGSNLTSYFSRAILKVYSWQFFLKENQCPKHALGTAMMDMVLHSPRAPT 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0601 419 Gene3D - 165 293 - -
Lele17g0601 419 SMART GluR_14 40 388 IPR001320 GO:0015276|GO:0016020
Lele17g0601 419 Pfam Ligand-gated ion channel 172 275 IPR001320 GO:0015276|GO:0016020
Lele17g0601 419 Gene3D - 35 164 - -
Lele17g0601 419 SUPERFAMILY Periplasmic binding protein-like II 13 387 - -
Lele17g0601 419 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 386 - -
Lele17g0601 419 Pfam Bacterial extracellular solute-binding proteins, family 3 68 386 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0601 Lele-ChrLele17 18111934 18120734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0601 38 399 Ion Channels AT2G29120 38.978 6.48e-69 233